Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00404 ATGTCGATATCTGGTATTCAAGGTCATCTTCTTGAGGTTACTGTCGTAGGATGTAACAAGTTGAAGGACACAGAATGGATTTCAAGACAGGACCCTTATGTTTGTCTGGAATATGGTAGCACTAAGTTCCGAACTCGAACACACACAGATGGAGGAAAAAATCCCACATTTCAAGAGAAGTTCGTCTTTTCGCTGATTGAAGGACTTAGGGAGCTTATTGTAGTTGTTTGGAATAGCAATACGCTTACTTATGATGATTTTATCGGCAGCGGAAAGGTTCAATTGCACAAGGTTCTCTCACAAGGTTTTGACGACTCGGCTTGGCCAATTCAAACCAAAACTGGCAGACATGCAGGTGAAGTAAAACTTATATTGCACTATGCACATGCCAATGCCGGTAAATATTCATCAAAGCCAACATCTAGCTATGCTCCATCAGCGCCACCATATGCACCGCCACCAAATCCCCAAGTCCATTCATATTCTGCACCACCTCCTACATCTTACCCACCACCGGCATCAGCAGTTCCATACCCACCAGTTGCCACTGCTTACCCTGCCTCATCTCCCTATCCTCCATATTCATCTGCCTATCCTCCACCGCCATACCCTCCTCCTCCTGCTGCCTATCCTCCCCCTCCATACCCAACAAGTTCAGCATATCCTCCATCTCATTATCCGCCACCTCCACCACCCTCTGGTCATTATCCGCCTGGTCCGTATCCTGGAATGTACCCTCCACCACCATATTG 752 0.4694 MSISGIQGHLLEVTVVGCNKLKDTEWISRQDPYVCLEYGSTKFRTRTHTDGGKNPTFQEKFVFSLIEGLRELIVVVWNSNTLTYDDFIGSGKVQLHKVLSQGFDDSAWPIQTKTGRHAGEVKLILHYAHANAGKYSSKPTSSYAPSAPPYAPPPNPQVHSYSAPPPTSYPPPASAVPYPPVATAYPASSPYPPYSSAYPPPPYPPPPAAYPPPPYPTSSAYPPSHYPPPPPPSGHYPPGPYPGMYPPPPY 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00404 250 MobiDBLite consensus disorder prediction 138 166 - -
Bva14g00404 250 PRINTS Proline rich extensin signature 190 202 - -
Bva14g00404 250 PRINTS Proline rich extensin signature 146 158 - -
Bva14g00404 250 PRINTS Proline rich extensin signature 202 223 - -
Bva14g00404 250 PRINTS Proline rich extensin signature 165 181 - -
Bva14g00404 250 CDD C2 11 108 - -
Bva14g00404 250 PANTHER CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790) 3 250 - -
Bva14g00404 250 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 128 IPR035892 -
Bva14g00404 250 Gene3D C2 domain 9 129 IPR035892 -
Bva14g00404 250 SMART C2_3c 10 107 IPR000008 -
Bva14g00404 250 MobiDBLite consensus disorder prediction 145 166 - -
Bva14g00404 250 Pfam C2 domain 10 101 IPR000008 -
Bva14g00404 250 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00404 Bva-Chr14 1989302 1991640 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00404 - - vvi:100241815 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00404 14 1989302 1991640 Bva14g00404 14 1989302 1991640 ECH