Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00376 ATGTCAGCTTTCTCTGTTCGCTTTCTTACTTCTCCGTGCCACCCCGATTCCCTGTCTTTTCGTTCCAAGACATGGATCTGTGCCGCCCCTGCGGTGGCTCCGGTTGCCCCTGAGGTGGGGACGTCGAGGTTGGAGCCCAGAGTGGAGGAGAGAGATGGGAGCTTGGTTTTGAAAGAGAAGTTCAGGGAAGGTATTAATCCTCAGGAAAAGGTGAAGATTGAGAAAGATCCAATGAAGCTTTTTACGGAAAATGAGATTGAAGCATTGGCCAACAAGTCTATGGAGGAGATTGACAGCGCCAAGCACACTAAGGATGATATTGATGTTAGGCTCAAATGGCTTGGCCTTTTTCACAGGAGAAAGCATCAGTATGGTAGATTTATGATGAGATTGAAGCTACCAAACGGGGTAACAACGAGTGAACAGACAAGGTACTTAGCGAGTGTGATAAGGAAATATGGGAAAGATGGCTGTGCTGATGTGACCACGAGGCAGAATTGGCAAATCCGAGGTGTGGTTCTGCCTGATGTTCCAGAAATCCTTAAGGGGCTCACAGAGGTTGGCTTAACGAGTCTGCAGAGTGGCATGGACAATGTCAGAAACCCTGTGGGCAACCCCCTTGCTGGCATTGACCCTGATGAGATCGTCGATACCAGACCTTACACTAACTTGTTATCCCAATTCATCACCGCCAATTCTCGTGGCAACATTGGCATCACAAACTTGCCTAGGAAGTGGAATGTATGTGTGGTGGGCTCCCATGATCTTTATGAGCATCCCCACATCAATGATCTGGCTTACATGCCTGCTATCAAGGATGGTCGATTTGGATTCAATTTGTTAGTGGGTGGTTTCTTTAGTCCCAAGCGATGTGAAGAGGCAATTCCACTTGATGCCTGGGTCTCAGCAGATGATGTGATCCCATTGTGCAAAGCTGTTTTGGAGGCCTATAGGGATCTTGGCTACAGAGGAAACAGACAGAAAACAAGAATGATGTGGCTAATTGATGAACTGGGTATAGAAGTATTCAGATCAGAGGTAGAAAAGAGAATGCCAGGTCAGAAGCTGGAGAGAGCCTCCCAACAAGACCTGGTTCAGAAACACTGGGAAAGAAGAGACTATATGGGTGTTCATCCACAAAAACAAGAGGGCTTAAGCTATGTTGGGATTCACATTCCAGTTGGTAGAGTCCAAGCAGATGACATGGATGAGCTAGCTCGTTTAGCAGACGAGTATGGCAGTGGCGAACTCAGGCTCACTGTGGAGCAGAACATTATAATCCCCAATGTGGATAACTCAAAAATCGATGCTTTGCTCAAAGAGCCTCTCTTGAAAGAGAGGTTTTCACCCGAACCATCCCTTCTGATGAAGTCACTGGTGGCCTGCACCGGGAACCAGTTTTGTGGGCAAGCCATTATTGAGACAAAAGCCAGAGCCTTGAAGGTGACTGAAGAAGTGGAACGGCAAGTGGCGGTGACGAGACCATTGAGAATGCACTGGACAGGGTGCCCAAACTCGTGTGGACAAGTGCAGGTTGCTGATATTGGATTCATGGGGTGCATGACAAGGGATGAGAATGGTAAAGCCTGTGAAGGTGTTGATATTTTCTTGGGAGGGAGAATTGGGAGTGATTCACATTTAGGAGATTTGTATAAAAAGGGTGTCCCTTGCAAGGACTTGGTTCCCATTGTGGTAGACATTCTGGTGAAACGTTTTGGAGCCGTCCCAAGGAATAGAGAAGAAGGGGAAGATTA 1754 0.4732 MSAFSVRFLTSPCHPDSLSFRSKTWICAAPAVAPVAPEVGTSRLEPRVEERDGSLVLKEKFREGINPQEKVKIEKDPMKLFTENEIEALANKSMEEIDSAKHTKDDIDVRLKWLGLFHRRKHQYGRFMMRLKLPNGVTTSEQTRYLASVIRKYGKDGCADVTTRQNWQIRGVVLPDVPEILKGLTEVGLTSLQSGMDNVRNPVGNPLAGIDPDEIVDTRPYTNLLSQFITANSRGNIGITNLPRKWNVCVVGSHDLYEHPHINDLAYMPAIKDGRFGFNLLVGGFFSPKRCEEAIPLDAWVSADDVIPLCKAVLEAYRDLGYRGNRQKTRMMWLIDELGIEVFRSEVEKRMPGQKLERASQQDLVQKHWERRDYMGVHPQKQEGLSYVGIHIPVGRVQADDMDELARLADEYGSGELRLTVEQNIIIPNVDNSKIDALLKEPLLKERFSPEPSLLMKSLVACTGNQFCGQAIIETKARALKVTEEVERQVAVTRPLRMHWTGCPNSCGQVQVADIGFMGCMTRDENGKACEGVDIFLGGRIGSDSHLGDLYKKGVPCKDLVPIVVDILVKRFGAVPRNREEGED 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00376 584 Pfam Nitrite and sulphite reductase 4Fe-4S domain 196 352 IPR006067 GO:0016491|GO:0020037|GO:0051536
Bva14g00376 584 SUPERFAMILY Nitrite/Sulfite reductase N-terminal domain-like 332 468 IPR036136 GO:0016491
Bva14g00376 584 ProSitePatterns Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 501 517 IPR006066 GO:0016491|GO:0020037|GO:0051536
Bva14g00376 584 SUPERFAMILY Nitrite and sulphite reductase 4Fe-4S domain-like 196 354 IPR045854 -
Bva14g00376 584 Pfam Nitrite and sulphite reductase 4Fe-4S domain 458 568 IPR006067 GO:0016491|GO:0020037|GO:0051536
Bva14g00376 584 SUPERFAMILY Nitrite/Sulfite reductase N-terminal domain-like 44 195 IPR036136 GO:0016491
Bva14g00376 584 Gene3D - 64 445 - -
Bva14g00376 584 Gene3D Sulfite Reductase Hemoprotein, domain 1 188 373 IPR045854 -
Bva14g00376 584 Gene3D Sulfite Reductase Hemoprotein, domain 1 453 583 IPR045854 -
Bva14g00376 584 SUPERFAMILY Nitrite and sulphite reductase 4Fe-4S domain-like 457 568 IPR045854 -
Bva14g00376 584 PRINTS Sirohaem Fe-binding site signature 457 475 IPR006066 GO:0016491|GO:0020037|GO:0051536
Bva14g00376 584 PRINTS Sirohaem Fe-binding site signature 501 519 IPR006066 GO:0016491|GO:0020037|GO:0051536
Bva14g00376 584 Pfam Nitrite/Sulfite reductase ferredoxin-like half domain 121 186 IPR005117 GO:0016491
Bva14g00376 584 Pfam Nitrite/Sulfite reductase ferredoxin-like half domain 378 441 IPR005117 GO:0016491
Bva14g00376 584 PANTHER FERREDOXIN--NITRITE REDUCTASE, CHLOROPLASTIC 1 584 - -
Bva14g00376 584 PANTHER FERREDOXIN--NITRITE REDUCTASE, CHLOROPLASTIC 1 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00376 Bva-Chr14 1869056 1871447 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00376 K00366 - gmx:100775519 1024.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00376 14 1869056 1871447 Bva14g00376 14 1869056 1871447 ECH