Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00341 ATGAGCGCTTCCGCTTTCGGTTCGATTTCTTTTGACATAGGTTACTCTTGGAAGGATATGAACAAGATATCCATGGTGAGGAAAACACATGCTGAAAAACCATTTGTTAAATGTTCGATGAAGTCCACAAACCATAATTCACAGAAGACAGTTAATATTGGTGTTCTTGGAGCTAGTGGTTACACTGGTTCTGAGGTTCTCCGGCTTTTGGCAAATCATCCACAATTTGGGGTTACCGTGTTGACTGCTGACAGAAAAGCTGGGCAGCCAATTGCATCTGTATTCCCTCATTTGTCCACACAAAATTTGCCGGATTTGGTTTCAATTAAAGACGCAAATTTTTCTGACGTGGATGCTGTATTCTGTTGTTTGCCCCATGGAACCACTCAGgAAATAATTAAAGGCCTGCCCAAGAACTTGAAGATTGTTGATCTTTCTGCGGACTTCCGGCTCCGAGATATATCTGAGTATGAGGAATGGTATGGTCAGCCACACAGTGCACCAGATTTGCAGAAAGAAGTTGTATATGGATTAACAGAGATTTCAAGGGAGGAAATAAAAAACGCACGCCTAGTTGCTAATCCTGGTTGTTATCCAACATCCATTCAGCTACCTCTTGTCCCACTAATCAAGGCTAAACTCATTGAGACTAGAAATATCATCATTGATTCAAAATCTGCTGTGAGTGGAGCAGGGCGTAGTGCCAAAGAATCGTTGTTATTCACAGAAGTAACTGAAGGTATCTATTCTTATGGTGTCACCCGACATCGCCATGttCCAGAAATCGAACAGGGACTCTCTGATGCCGCACGTACAAAGATAACCATTAGTTTTACCCCTCACCTAATTCCAATGACTCGTGGTATGCAATCAACAATATATGTTGAAATGGGTCCAGGAGTAGGAATTGAGGACTTGTACCAGCATCTGAAACTTTCCTACGAGGATGAAGAATTTGTAGTGCTCTTGGAAAAAGGAATTGTTCCCCGAACTCATAGTGTTAAAGGAACTAATTACTGTTTGATCAATGTTTTACCCGATCGAATCCCTGGAAGAGCAATTATTATATCAGTTATAGATAATCTCGTGAAGGGGGCTTCAGGTCAAGCTTTACAAAACCTTAATGCCATGATGGGGTTTTCTGAAAATTTGGGGCTTCAGTACCAGCCTCTGTTtcctta 1181 0.4132 MSASAFGSISFDIGYSWKDMNKISMVRKTHAEKPFVKCSMKSTNHNSQKTVNIGVLGASGYTGSEVLRLLANHPQFGVTVLTADRKAGQPIASVFPHLSTQNLPDLVSIKDANFSDVDAVFCCLPHGTTQEIIKGLPKNLKIVDLSADFRLRDISEYEEWYGQPHSAPDLQKEVVYGLTEISREEIKNARLVANPGCYPTSIQLPLVPLIKAKLIETRNIIIDSKSAVSGAGRSAKESLLFTEVTEGIYSYGVTRHRHVPEIEQGLSDAARTKITISFTPHLIPMTRGMQSTIYVEMGPGVGIEDLYQHLKLSYEDEEFVVLLEKGIVPRTHSVKGTNYCLINVLPDRIPGRAIIISVIDNLVKGASGQALQNLNAMMGFSENLGLQYQPLFP 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00341 393 Gene3D Dihydrodipicolinate Reductase; domain 2 195 361 - -
Bva14g00341 393 Hamap N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 51 387 IPR000706 GO:0003942|GO:0006526
Bva14g00341 393 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 197 361 - -
Bva14g00341 393 Pfam Semialdehyde dehydrogenase, dimerisation domain 206 364 IPR012280 GO:0008652|GO:0016620|GO:0046983
Bva14g00341 393 SMART Semialdhyde_dh_3 52 189 IPR000534 GO:0016620|GO:0051287
Bva14g00341 393 TIGRFAM argC: N-acetyl-gamma-glutamyl-phosphate reductase 52 393 IPR000706 GO:0003942|GO:0006526
Bva14g00341 393 Gene3D - 53 379 - -
Bva14g00341 393 Pfam Semialdehyde dehydrogenase, NAD binding domain 52 189 IPR000534 GO:0016620|GO:0051287
Bva14g00341 393 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 49 222 IPR036291 -
Bva14g00341 393 ProSitePatterns N-acetyl-gamma-glutamyl-phosphate reductase active site. 192 208 IPR023013 GO:0003942
Bva14g00341 393 PANTHER N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTASE, CHLOROPLASTIC-RELATED-RELATED 1 393 - -
Bva14g00341 393 PANTHER N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTASE, CHLOROPLASTIC-RELATED 1 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00341 Bva-Chr14 1687842 1692499 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00341 K00145 - gmx:100801527 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00341 14 1687842 1692499 Bva14g00341 14 1687842 1692499 ECH