Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00316 ATGGGGAAGAGCAAGAGTTACCTGGCTATGAGGACAGATTATGATGATACAAGAGACCTGATCGGCTCTGATCTGAGGGAGCTGGCCAATGCTGCTAGAAAGCTCACCAGACATGCCATTCAACTTGGTAGCTTAGGATTTGGCACCTTTTTCTTCGAATGGCTTGCTTCCTTTGCCGCCATttatttgttgattttggatCGTACAAACTGGAAGACCAACATCCTTACATCACTACTCATTCCCTACATTTTCTTAAGTCTCccttcattaattttcatcGTCTTAAGGGGAGAGATCGGTAAATGGATTGCTTTCGTTGCTGTCGTGTTGCGCCTTTTCTTTCCGAAGCACTTCCCTGATTGGCTGGAATTGCCTGGAGCCTTGATTCTTCTCATTGTCGTGGCTCCGAGTCTGTTTGCTGACACCTTGAGAAGCAGCGTGGTGGGTGTGGCTGTTTGCCTTATTATTGCATGTTATTTGTTCCAAGAGCACATTCGAGCATCTGGGGGATTCAGGAATTCCTTCACACGACCCCATGGCATATCAAACACAATCGGTATACTCCTTATCTTAATCTATCCCGTTTGGGCCTTGGTACTCTACTTTGTGTA 614 0.4397 MGKSKSYLAMRTDYDDTRDLIGSDLRELANAARKLTRHAIQLGSLGFGTFFFEWLASFAAIYLLILDRTNWKTNILTSLLIPYIFLSLPSLIFIVLRGEIGKWIAFVAVVLRLFFPKHFPDWLELPGALILLIVVAPSLFADTLRSSVVGVAVCLIIACYLFQEHIRASGGFRNSFTRPHGISNTIGILLILIYPVWALVLYFV 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00316 204 Pfam Cold acclimation protein WCOR413 11 191 IPR008892 GO:0016021
Bva14g00316 204 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED 3 203 - -
Bva14g00316 204 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 3 203 IPR008892 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00316 Bva-Chr14 1597658 1597858 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00316 - - oeu:111381429 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00316 14 1597658 1597858 Bva14g00316 14 1597658 1597858 ECH