Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00282 ATGTCAGTGTCTCCAAGCTTCACCGTCGCTTCTCGCAGCAGAAACTCCTCCGACTTCTTATTATCTCGCAGAAACCTATGTTCCGTAACTTCTTCCTTGCCAAGCCCCTATGGCGATTTGTCGAAAATCGGGTTATCTATTAAAGGTCGTGGCTTTCCTTTAAAACTCGATGAAAGAAATCTTCATAATGCTAGTATAAGCTATGGTGCAATAGAAGCCAAAAAAGGGAATCCACCGGTAATGCCTTTTGTGATGACTCCAGGAGGACCTCTGGATCTTTCATCTGTATTGTTTAGAAATCGTATAATATTCATAGGTCAGCCTGTCAACGCAGAAGTGGCTCAGCGAGTTATATCACAGCTCGTGACTCTGGCTACTGTCGATGAGGATTCAGATATACTGGTTTATTTGAACTGTCCTGGTGGAAGCACGTATTCAGTGTTGGCAATTTATGATTGCATGTCTTGGATCAAGCCAAAGGTTGGCACAGTATGTTTCGGGGTAGCTGCAAGTCAAGGAGCACTTCTCCTTGCTGGTGGAGAGAAGGGGATGCGCTACGCGATGCCAAATGCACGCATAATGATACATCAACCTCAGAGTGCATGTGGGGGTCATGTAGAAGATGTAAGACGTCAAGTGAATGAAGCTGTCCAATCACGTCATAAAATTGATAGGATGTATTCTGCTTTTACCGGCCAGCCATTAGAGAAGGTGCAACAATACACCGAGAGGGACCGTTTTCTATCTGTTTCTGAGGCTTTGGAGTTTGGTCTCATTGATGGTGTCCTGGAAACAGAATATTG 803 0.4458 MSVSPSFTVASRSRNSSDFLLSRRNLCSVTSSLPSPYGDLSKIGLSIKGRGFPLKLDERNLHNASISYGAIEAKKGNPPVMPFVMTPGGPLDLSSVLFRNRIIFIGQPVNAEVAQRVISQLVTLATVDEDSDILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNARIMIHQPQSACGGHVEDVRRQVNEAVQSRHKIDRMYSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00282 267 ProSitePatterns Endopeptidase Clp histidine active site. 185 198 IPR033135 -
Bva14g00282 267 Hamap ATP-dependent Clp protease proteolytic subunit [clpP]. 80 266 IPR001907 GO:0004176|GO:0004252|GO:0006508
Bva14g00282 267 PRINTS Clp protease catalytic subunit P signature 92 107 IPR001907 GO:0004176|GO:0004252|GO:0006508
Bva14g00282 267 PRINTS Clp protease catalytic subunit P signature 241 260 IPR001907 GO:0004176|GO:0004252|GO:0006508
Bva14g00282 267 PRINTS Clp protease catalytic subunit P signature 163 180 IPR001907 GO:0004176|GO:0004252|GO:0006508
Bva14g00282 267 PRINTS Clp protease catalytic subunit P signature 132 152 IPR001907 GO:0004176|GO:0004252|GO:0006508
Bva14g00282 267 PRINTS Clp protease catalytic subunit P signature 184 203 IPR001907 GO:0004176|GO:0004252|GO:0006508
Bva14g00282 267 SUPERFAMILY ClpP/crotonase 91 265 IPR029045 -
Bva14g00282 267 CDD S14_ClpP_2 92 262 IPR001907 GO:0004176|GO:0004252|GO:0006508
Bva14g00282 267 Gene3D - 71 267 - -
Bva14g00282 267 Pfam Clp protease 92 265 IPR023562 -
Bva14g00282 267 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 9 267 IPR023562 -
Bva14g00282 267 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 6, CHLOROPLASTIC 9 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00282 Bva-Chr14 1448892 1451450 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00282 K01358 - gmx:100799710 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00282 14 1448892 1451450 Bva14g00282 14 1448892 1451450 ECH