Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00277 ATGGAGGAGAAACGCCGTGAAGCCGGAGCGCTGCTGCCGTCTAGCGCTGATTCGCCGGCATCCGAACCGGCATCCTCAAGGCGCCGTGCTGGAGGTCAAAAGAGAAAGGCCAACAGTCTCAACGCGTCGAATTCTTCGTCTACACCTTCGAAACGCATTACGCGCGAGAAGGCTTCGCCTGCCCACCCTCCGGCGCACAATGGCCCCTTGACAAGGGCTCGCCAAATTCCCAATAATCTCGCTGCGGCTGCCGCCGAGTCAGCTTCGGCATCAGGCGGCGGGTCTGCTCCACCGGCCGCCTTTGTGAAACAGTCCAAGCATTCAGTGTCTCATGAAATTTTGAGTGGAAACTTGGTAGCGCCGGGAGAGGAATTCAACAAGGAGAGTAAGTGGGAGGCTCTGGAAGCTGCAATTGAAGCTGAATTTGAAGATATCAGATCTCGCGGTGTCAATGCTCATGTAGTTCCGAGTCATTGCGGTTGGTTTTCATGGACGGATATCCATCCGATTGAGAAGCATACATTGCCTTCATTTTTCAATGGGAAAACTGAAAATCGGACTCCTGATACATACATTGAGATACGTAATTGGATTATGAAGAAATTCCATGCTAATCCAAATGCACTGATTGAATTGAAAGATCTGTCAGAGCTTAATGTTGCAGACTTGGATGCTAGGCAAGAGGTAATGGAGTTTCTGGACTACTggggtttaattaatttccatcCGTTCCCATCTATGGATTCTGCTATGGCCAGTGCAGATGATGATGTTGTGGCAGAAAAAAATTCCTTGCTTGAACAATTGTATCGCTTTGAAACTCTACAATTACGTTCACCTGTTGTTCCAAAGACTACCTTACTGACTCCATCTATGCCGCCTGGCTTGTTTCCCGAATCTACAATTGCTGAAGAGTTGGTGAAACAGGAGGGTCCATCAGTTGAGTATCACTGCAACTCTTGTTCTGCCGATTGTTCTCGCAAGCGCTACCATTGTCAGAAGCAGGCAGATTTTGATCTATGTACCGATTGCTTTAGTAATGGGAAATTTGGCTCTGGCATGTCTTCAACGGATTTTATACTTATGGAACCAGCTGAAGTTCCAGGTGTTAGTGGTGGAAAGTGGACTGATCAGGAAACTCTTCTGCTTCTTGAAGCACTAGAGCTGTATAAGGAAAATTGGAATGAAATTGCGGAGCATGttgcaacaaaaacaaaagcccAATGTATATTGCACTTTGTTCAGATGCCAATTGAGGATGCCTTTGTTGATTGTAGTGATGATATCGAGGCTAGTTTCAAAGAAAATGCCGACGCACCTGCAACGAACAATGATTCCTCTGTCCTAAAAAATACTTCTGAAATGATCGAGAGCAGGACTGGTGATGGTGATGGTGGTGAAGGCCAGATGTTGAGTCCCCAAAATGAAATTTCCAAGACTGAAGATGTTAGCAAAGTGAAAGGAAATAAGGAGTCTCCAAAGCCTGAAGATCATGGCGGGGAGAAAATTACTGAGGAAACTTTCAAACAAGATGATACTGGTGAAGTCAAAATTAGTGATGCAGACAATGCTTGTGCCATAATGGCTCTTAAGGAAGCATTTGAAGCTGTCGGTTATTCTCTTGGATCTGAAGACCCATCTTCATTTGCTGAAGTGGGCAATCCTGTCATGGCATTGGCAGTTTTCCTGGCTCGGTTGGTGGGTAATGATGCAGCTGTTGCTTCTGCGCATAACTCCTTAAAATCCATTTCTGGAAATTCTCCCAGTATTCAGCTTGCTGCAAGGCATTGCTTTGTTTTGGAAGATCCACCAGATGATAAGAAGGAAACAACTAGTTCTGAAAGGGATTCTAATAAAGATGGAGACCCGGATGACAAAAATGACAAACAGGATAGATCAATGTTAGATGATAAGGGTTTATCAAATGATGTCAATGACAAGAAAACTGAAACTAATGCCGTAGAAAATAAGAGTCCGCTGGATTCTACAAATGATGGAGCCTCAGAAAAACCTATTTCTTTAAAGGAGCAAGCAATGCCAGCCAATCATGAGGAAGCTGGGCTTGATAATTGTAATGATCCAAGCAATTCAAAGTTACCCGCTAATCAAGCAGCATGCACTACCCAGGATTCAGATGGTTCAACTTCCAAGGCTGAAATCATATCTAGTTCTGTGGGGTTAGGTGAAGGAGCTTCAATTAAAGAGCCTTGTCAGCCTGCAAAGGAACTAAAGGATGGAAATGTAGTGTCTGATTCACTTCCCTCAGAGAAGAATGAAGTACGACATTCAGTTGCATCCAATCCAGCAGGAGATCATCTAGAGTCTTCACAGACACCAAAGGAGTCTGAGGTGGTCTCTGTTTCTATTACCTCGGATGAGAGCAAGCATTCAAAATCACAATCTACAAATCCAGTTGATGAGTCTCTGGGAATAACAAACTCAGTAATGGATGTTGATTCGGCTTCTAATTCCTTGCCATCTGAGAGGAATATATCTCACCCACTAGTTACATCAGATTCATCCCAACCTACAAGGACGGAAAAGGATGTAGATATGATGCCTTCTGTGCCTTTGGATAAGAATGAACCTTCACATCCAGTTATGTCAAATTCTCATGCTGAAAATGGAGCATGCACagGTGAAGTTCCCACAGAAGATGGCACGAAATCAAAAGATGATAGTATGAAAAAAAAGCAGGATAACAAATTTGAGAAAGTCAAGCGTGCTGCAGTTTCTACACTTGCTGCAGCAACAGTGAAGGCAAAACTTCTAGCCAACCAGGAAGAAGATCAAATCCGACAACTTGCTACATTGTTAATAGAAAAGCAGTTGCATAAGTTGGAAGCTAAGTTAGCTTTTTTCAATGAGATGGAGAATGTAGTTATGAGGATGAGGGAGCATTTAGACCGGTCACGGCAAAAGCTTTACCATGAGCGTGCAATGATAATTGCATCCCGGCTTGGTTTACCAGCGTCCTCATCCAGAGGAGTACCATCATCATTGCCAACAAATAGAATTGCTACGAACCTTGCAAACTTAGGCCCCAGACTACCAATCACCATGAATCCCCAAAGGCCTCCTATGTCTAGATCCATGGGCACTTCGGCAACCACCCTTCCAAATCCATTAGCATCTGCAACTGCGGCAGGAAACTCAGTTCGGCCAGCCAGCCAGGACAAGCTTTCTTCTGTTGggacaaaata 3203 0.4371 MEEKRREAGALLPSSADSPASEPASSRRRAGGQKRKANSLNASNSSSTPSKRITREKASPAHPPAHNGPLTRARQIPNNLAAAAAESASASGGGSAPPAAFVKQSKHSVSHEILSGNLVAPGEEFNKESKWEALEAAIEAEFEDIRSRGVNAHVVPSHCGWFSWTDIHPIEKHTLPSFFNGKTENRTPDTYIEIRNWIMKKFHANPNALIELKDLSELNVADLDARQEVMEFLDYWGLINFHPFPSMDSAMASADDDVVAEKNSLLEQLYRFETLQLRSPVVPKTTLLTPSMPPGLFPESTIAEELVKQEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFSNGKFGSGMSSTDFILMEPAEVPGVSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDAFVDCSDDIEASFKENADAPATNNDSSVLKNTSEMIESRTGDGDGGEGQMLSPQNEISKTEDVSKVKGNKESPKPEDHGGEKITEETFKQDDTGEVKISDADNACAIMALKEAFEAVGYSLGSEDPSSFAEVGNPVMALAVFLARLVGNDAAVASAHNSLKSISGNSPSIQLAARHCFVLEDPPDDKKETTSSERDSNKDGDPDDKNDKQDRSMLDDKGLSNDVNDKKTETNAVENKSPLDSTNDGASEKPISLKEQAMPANHEEAGLDNCNDPSNSKLPANQAACTTQDSDGSTSKAEIISSSVGLGEGASIKEPCQPAKELKDGNVVSDSLPSEKNEVRHSVASNPAGDHLESSQTPKESEVVSVSITSDESKHSKSQSTNPVDESLGITNSVMDVDSASNSLPSERNISHPLVTSDSSQPTRTEKDVDMMPSVPLDKNEPSHPVMSNSHAENGACTGEVPTEDGTKSKDDSMKKKQDNKFEKVKRAAVSTLAAATVKAKLLANQEEDQIRQLATLLIEKQLHKLEAKLAFFNEMENVVMRMREHLDRSRQKLYHERAMIIASRLGLPASSSRGVPSSLPTNRIATNLANLGPRLPITMNPQRPPMSRSMGTSATTLPNPLASATAAGNSVRPASQDKLSSVGTK 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00277 1067 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3D 44 1030 - -
Bva14g00277 1067 SUPERFAMILY Homeodomain-like 160 242 IPR009057 -
Bva14g00277 1067 MobiDBLite consensus disorder prediction 769 843 - -
Bva14g00277 1067 MobiDBLite consensus disorder prediction 885 902 - -
Bva14g00277 1067 SMART sant 371 419 IPR001005 -
Bva14g00277 1067 ProSiteProfiles Myb-like domain profile. 367 417 IPR001005 -
Bva14g00277 1067 MobiDBLite consensus disorder prediction 456 513 - -
Bva14g00277 1067 MobiDBLite consensus disorder prediction 1014 1067 - -
Bva14g00277 1067 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 368 409 IPR017930 -
Bva14g00277 1067 PANTHER SWI/SNF COMPLEX-RELATED 44 1030 - -
Bva14g00277 1067 MobiDBLite consensus disorder prediction 601 654 - -
Bva14g00277 1067 MobiDBLite consensus disorder prediction 689 722 - -
Bva14g00277 1067 CDD SANT 391 416 IPR001005 -
Bva14g00277 1067 MobiDBLite consensus disorder prediction 480 513 - -
Bva14g00277 1067 Gene3D - 306 359 IPR043145 -
Bva14g00277 1067 SUPERFAMILY Homeodomain-like 369 423 IPR009057 -
Bva14g00277 1067 Pfam Myb-like DNA-binding domain 373 415 IPR001005 -
Bva14g00277 1067 SUPERFAMILY RING/U-box 314 375 - -
Bva14g00277 1067 ProSiteProfiles SANT domain profile. 370 421 IPR017884 -
Bva14g00277 1067 Gene3D - 370 421 - -
Bva14g00277 1067 Pfam SWIRM-associated region 1 913 989 IPR032451 -
Bva14g00277 1067 MobiDBLite consensus disorder prediction 655 670 - -
Bva14g00277 1067 MobiDBLite consensus disorder prediction 1024 1067 - -
Bva14g00277 1067 MobiDBLite consensus disorder prediction 36 54 - -
Bva14g00277 1067 MobiDBLite consensus disorder prediction 601 902 - -
Bva14g00277 1067 Pfam SWIRM domain 156 241 IPR007526 GO:0005515
Bva14g00277 1067 Pfam Zinc finger, ZZ type 315 351 IPR000433 GO:0008270
Bva14g00277 1067 CDD ZZ_RSC8 316 360 IPR041984 -
Bva14g00277 1067 SMART zz_5 312 356 IPR000433 GO:0008270
Bva14g00277 1067 ProSiteProfiles SWIRM domain profile. 153 250 IPR007526 GO:0005515
Bva14g00277 1067 MobiDBLite consensus disorder prediction 1 103 - -
Bva14g00277 1067 Gene3D - 159 244 IPR036388 -
Bva14g00277 1067 ProSitePatterns Zinc finger ZZ-type signature. 318 344 IPR000433 GO:0008270
Bva14g00277 1067 ProSiteProfiles Zinc finger ZZ-type profile. 313 370 IPR000433 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00277 Bva-Chr14 1429009 1435549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00277 316 413 EF-hand Containing Proteins AT3G07740 36.449 2.19e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00277 K11649 - gmx:100786881 1185.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00277 14 1429009 1435549 Bva14g00277 14 1429009 1435549 ECH