LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva14g00254	ATGGCTTCTGTTTGTGTGAACTTGAAAGCCAATACCAATTTAGCAAACGCaagaaaagattatatttttcgTCAAGATAATGCATTTTTGGGGGAGAGAATTAAGGGGAACCTAAAAAACAGTCCCTGGGTCAATCGGTTGTCAACAAGTTTGAGAACCGAGAAGGGGATCAGAAAGGTGAAACCTGGCGTTGCCTCTGCTGTTCTTACAACAAATGATACCAGAGAAGCTTTGACCTTGCAAGTGCCATCTTTTCTCAGACTAAAGGCAGACCCGAAAAATGTAGTCTCCATCATATTGGGAGGGGGTCCCGGGACTCACCTTTTTCCTCTTACTAAAAGAGCTGCAACTCCGGCTGTCCCTGTTGGTGGATGCTACAGGCTTATAGACATCCCAATGAGCAACTGCATCAACAGTGGCATTAACAAGATATTTGTTCTGACTCAGTTTAATTCTGCATCTCTGAACCGTCACATAGCGCGCACCTACTTGGGAAACGGTGTTAGCTTTGGAGATGGGATTGTAGAGGTTCTTGCAGCTACTCAAACACAAGGAGAAGCAGGTAAGAATTGGTTTCAAGGGACTGCTGATGCTGTCAGACAATTTACATGGGTATTTGAGGATGCCAAGAACACCAACATCGAGAATGTATTGATCTTGGCTGGGGATCATCTATACCGAATGGATTACATGGACCTTATTCAGAGCCATGTTGATAGAAATGCTGATATTACAGTTTCGTGTGCTGCAGTGGGTGACAGCCGCGCATCTGATTATGGATTGGTGAAGGTAGATGGCAGTGGCCGCATCATCCAATTTTCAGAAAAACCAAGGGGTGCTGATCTGAAAGCAATGCAAGTAGATACCAGTTTTATTGGGCTGTCACGTCAAGATGCATTGAAATTGCCATATATTGCATCCATGGGTGTTTACGTATTCAAGACAGAGGTTTTACTGAAGCTTCTGAAATGGAGATATCCTACAGCTAATGACTTTGGATCTGAAATCATTCCCGCTTCTGTGAGGGAAAATGATGTCCAAgCGTACTTTTTCAGAGACTACTGGGAAGATATTGGAACTATAACATCCTTTTATGAAGCTAACCTTGCACTTGCTGAAGAGAATccaaagtttgaattttatgaCCCCAAGACACCCATTTACACATCTCCTAGATTCCTACCACCTACGAAGATCGATAACTCTCGGATTGTGGATGCAATAATCTCACATGGATGCTTCCTGAGAGAATGTACTGTTCAACACTCCATTGTGGGCGAACGTTCACGTTTGGATTACGGTGTTGAGCTCCAGGACACTGTGATGATGGGTGCGGACTACTATGAAACTGAATCAGAAATTGCTTCTCTGCTAGCAGAGGGAAAGGTCCCAATCGGGATTGGAAGCAATACCAAAATTAGGAACTGCATCATTGACAAGAATGCGAGGATAGGGAAAGATGTCATCATCATGAACAAAGATGGTGTTCAAGAAGCGGATAAACCAGAAGAAGGATTTTACATTCGATCAGGAATCACCGTCATAATGGAGAAGGCAACAATAGAAGATGGCAGAGTCATATA	1583	0.4251	MASVCVNLKANTNLANARKDYIFRQDNAFLGERIKGNLKNSPWVNRLSTSLRTEKGIRKVKPGVASAVLTTNDTREALTLQVPSFLRLKADPKNVVSIILGGGPGTHLFPLTKRAATPAVPVGGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYLGNGVSFGDGIVEVLAATQTQGEAGKNWFQGTADAVRQFTWVFEDAKNTNIENVLILAGDHLYRMDYMDLIQSHVDRNADITVSCAAVGDSRASDYGLVKVDGSGRIIQFSEKPRGADLKAMQVDTSFIGLSRQDALKLPYIASMGVYVFKTEVLLKLLKWRYPTANDFGSEIIPASVRENDVQAYFFRDYWEDIGTITSFYEANLALAEENPKFEFYDPKTPIYTSPRFLPPTKIDNSRIVDAIISHGCFLRECTVQHSIVGERSRLDYGVELQDTVMMGADYYETESEIASLLAEGKVPIGIGSNTKIRNCIIDKNARIGKDVIIMNKDGVQEADKPEEGFYIRSGITVIMEKATIEDGRVI	527

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva14g00254	527	SUPERFAMILY	Nucleotide-diphospho-sugar transferases	93	488	IPR029044	-
	Bva14g00254	527	PANTHER	GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 3, CHLOROPLASTIC	1	527	-	-
	Bva14g00254	527	TIGRFAM	glgC: glucose-1-phosphate adenylyltransferase	95	491	IPR011831	GO:0005978\|GO:0008878
	Bva14g00254	527	Pfam	Nucleotidyl transferase	97	373	IPR005835	GO:0009058\|GO:0016779
	Bva14g00254	527	ProSitePatterns	ADP-glucose pyrophosphorylase signature 2.	191	199	IPR005836	GO:0005978\|GO:0008878
	Bva14g00254	527	ProSitePatterns	ADP-glucose pyrophosphorylase signature 3.	306	316	IPR005836	GO:0005978\|GO:0008878
	Bva14g00254	527	Gene3D	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	84	392	IPR029044	-
	Bva14g00254	527	SUPERFAMILY	Trimeric LpxA-like enzymes	389	527	IPR011004	-
	Bva14g00254	527	CDD	LbH_G1P_AT_C	395	521	-	-
	Bva14g00254	527	Gene3D	Hexapeptide repeat proteins	393	527	-	-
	Bva14g00254	527	CDD	ADP_Glucose_PP	98	358	-	-
	Bva14g00254	527	PANTHER	GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED	1	527	IPR011831	GO:0005978\|GO:0008878
	Bva14g00254	527	ProSitePatterns	ADP-glucose pyrophosphorylase signature 1.	101	120	IPR005836	GO:0005978\|GO:0008878

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva14g00254	Bva-Chr14	1310401	1314825	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva14g00254	K00975		-	gmx:100808791	917.146

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva14g00254	14	1310401	1314825	Bva14g00254	14	1310401	1314825	ECH