Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00227 ATGATGGCGGAGCAGAGGAGTGGTGAAGCAGTAGAGGGAGAGGAGAAGAACAAAAACGATGAGAAGAAGAATGCAGATCCAGATTTGTTCTGCTGCTTGCTGCAGCCTCTGAGCGCTGAAAGTGATGCCGAATATATCGGCATTCGGCGCCTCCTTCTTTACCGGAAGGCCGAGGCCGGTGTTTTTCGCCGTGGAGAATGGAGATGCAATGGAAAAGGTTATGTGGCCTATCGTAATTACATATGTAGGCCAAGGAACTGGGAAAGTTCATGTGTCCCAAGCCTTCAAGGGACTCCCGGAAACAGTGGGCGATGGATTCCTCCTCCAAGTCCAGTATCCCGTTGGTCTGAAGTGGACAGCTGGAGTTCTGGGCGGGATCTGCAGAGTGCCAATCCACTCTCTAATCATAGAGCAAGTTTTGCCTCAAGTGCAAGTGATAGTGATCGTCCACGTCATCGAGGGGTTGAGCCTGCCTATTCTTTTGTCGGAATGCATTGTATCTTTGATCAGTGCAAAGCTTCGGTTACCGTATTGAAGTTTGGGCACATGAGTTCTGATCTTCTTGCATATGGGGCATCAGATGGAACCTTGACGGTATGCACTGTCTCCGAGAAACCTTCAATCCTCAAACAATTGATTGGGCATTCCAAAGATGTCACAGattttgatttttcttcaaacAATCAGTAtattgcttcttcttcattggATAAAACTGTGAGAGTATGGCAGATAGAGAAAGGCATTTGCATACGGGTGATATATGGAGTTTCTTCACAATTGTGTATACGTTTTCACCCTGTAAATAACAACTTCCTTTCAGTTGGCAAtgcaaacaaagaaatcaatGTTTTCAATTTCAGCACCGGAAgggtaattaataaaacagtATTTGACAGTGAAGTTACCTCTATGGATAATGATCATACAGGAAACATCATTTTTTGTGGAGATGCGCAGGGGTGCATATACTCAGTAAGTATGAACTCTCGCAGCGGAGTGTTATCACGCAGTCATCGTTATAGAAGCAGTAGCAGGCACAAATCTCCTGTCTCAACAGTGCAGTATCGAAGCTTCTCTCTACTGGCTGGAGGACCTGTGTTGCTGGCATGTACTCAGGATGGAAATCTGTCTTTCTTCAGTGTTGCTCTGGAGGTACAAGGCTATTTGACTCTTCGCTGCACGCTCAAATTAGCACCACGTATACACAATATTCAGGCTTCTTTTTGTCCTCTTCTGTCGCTTGAAAAAGGAGAATTCATAGTTGCTGGAAGTGAGGATTCAAATGTCTATTTCTACGATTTAACAAGGCCAAGACATACATGCGTAAACAAGCTACAGGGTCATAGTTTTCCAGTCATAGGTATTGCCTGGAATCACGGAGAAAACTTGTTGGCTTCATCTGATTTTTTTGGCACAGTAATTGTATGGAAGAGAGCGAGaacaaatcaaaacaagaatTCATG 1466 0.4229 MMAEQRSGEAVEGEEKNKNDEKKNADPDLFCCLLQPLSAESDAEYIGIRRLLLYRKAEAGVFRRGEWRCNGKGYVAYRNYICRPRNWESSCVPSLQGTPGNSGRWIPPPSPVSRWSEVDSWSSGRDLQSANPLSNHRASFASSASDSDRPRHRGVEPAYSFVGMHCIFDQCKASVTVLKFGHMSSDLLAYGASDGTLTVCTVSEKPSILKQLIGHSKDVTDFDFSSNNQYIASSSLDKTVRVWQIEKGICIRVIYGVSSQLCIRFHPVNNNFLSVGNANKEINVFNFSTGRVINKTVFDSEVTSMDNDHTGNIIFCGDAQGCIYSVSMNSRSGVLSRSHRYRSSSRHKSPVSTVQYRSFSLLAGGPVLLACTQDGNLSFFSVALEVQGYLTLRCTLKLAPRIHNIQASFCPLLSLEKGEFIVAGSEDSNVYFYDLTRPRHTCVNKLQGHSFPVIGIAWNHGENLLASSDFFGTVIVWKRARTNQNKNS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00227 488 Gene3D - 259 399 IPR015943 GO:0005515
Bva14g00227 488 ProSiteProfiles Trp-Asp (WD) repeats profile. 212 253 IPR001680 GO:0005515
Bva14g00227 488 Gene3D - 160 258 IPR015943 GO:0005515
Bva14g00227 488 ProSiteProfiles Trp-Asp (WD) repeats profile. 446 478 IPR001680 GO:0005515
Bva14g00227 488 MobiDBLite consensus disorder prediction 8 22 - -
Bva14g00227 488 Gene3D - 401 487 IPR015943 GO:0005515
Bva14g00227 488 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 212 248 - -
Bva14g00227 488 PANTHER WD REPEAT-CONTAINING PROTEIN 13 16 482 - -
Bva14g00227 488 MobiDBLite consensus disorder prediction 123 152 - -
Bva14g00227 488 Pfam WD domain, G-beta repeat 209 243 IPR001680 GO:0005515
Bva14g00227 488 PANTHER WD REPEAT PROTEIN 26-RELATED 16 482 - -
Bva14g00227 488 MobiDBLite consensus disorder prediction 123 145 - -
Bva14g00227 488 MobiDBLite consensus disorder prediction 1 22 - -
Bva14g00227 488 SUPERFAMILY WD40 repeat-like 169 480 IPR036322 GO:0005515
Bva14g00227 488 SMART WD40_4 439 478 IPR001680 GO:0005515
Bva14g00227 488 SMART WD40_4 398 434 IPR001680 GO:0005515
Bva14g00227 488 SMART WD40_4 161 201 IPR001680 GO:0005515
Bva14g00227 488 SMART WD40_4 205 244 IPR001680 GO:0005515
Bva14g00227 488 SMART WD40_4 289 327 IPR001680 GO:0005515
Bva14g00227 488 SMART WD40_4 247 286 IPR001680 GO:0005515
Bva14g00227 488 SMART WD40_4 337 381 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00227 Bva-Chr14 1179680 1185942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00227 184 306 Miscellaneous Gene Families AT5G08390 24.800 3.78e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00227 K24739 - gmx:100792346 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00227 14 1179680 1185942 Bva14g00227 14 1179680 1185942 ECH