Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03560 ATGAGGTTGTGGTTGATGGATCCTCAAATGCTGTGGCGGCTAGCAAACCCTAATCAGAGTTGCAAGTCTCGTCATACTCTTGATTCAAGAGACATTGTAGAGTTGCAATTGAAGCAGCTTGATTGCGAAGTAACCATCGGGAAAAAGGAGGCCATACCTCAACCTGCATCTCCTGATGAATTTGCCATGATTCAGTCACCCCCTTCAATAGTCGTCCCTCCACCCACACCAGCTCCTTCTACTCCTGCTCCATCTACTTCTCCCTCTGCTGTTAAGTCAGCCAAATCATCGCATCCACCTCTTAAGTGCCCCATGGCAGGGACATTCTATCGAAGTCCAGCACCTGGTGAACCTCCATTTGTGAAGGTTGGAGGCAAGGTAAAAAAAGGACAAGTCTTGTGCATCATTGAAGCCATGAAATTGATGAACGAAATAGAGGCTGATCAATCGGGAACTGTAGTTGATATCCTTGTACAAGATGGCAAACCTGTAAGCGTTGACACGCCCCTTTTTGTGATTGAACCCTA 527 0.4668 MRLWLMDPQMLWRLANPNQSCKSRHTLDSRDIVELQLKQLDCEVTIGKKEAIPQPASPDEFAMIQSPPSIVVPPPTPAPSTPAPSTSPSAVKSAKSSHPPLKCPMAGTFYRSPAPGEPPFVKVGGKVKKGQVLCIIEAMKLMNEIEADQSGTVVDILVQDGKPVSVDTPLFVIEP 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03560 175 MobiDBLite consensus disorder prediction 68 84 - -
Bva13g03560 175 ProSitePatterns Biotin-requiring enzymes attachment site. 130 147 IPR001882 -
Bva13g03560 175 Gene3D - 98 174 - -
Bva13g03560 175 TIGRFAM BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 27 174 IPR001249 GO:0003989|GO:0006633|GO:0009317
Bva13g03560 175 Pfam Biotin-requiring enzyme 101 173 IPR000089 -
Bva13g03560 175 PRINTS Acetyl-CoA biotin carboxyl carrier protein signature 103 116 IPR001249 GO:0003989|GO:0006633|GO:0009317
Bva13g03560 175 PRINTS Acetyl-CoA biotin carboxyl carrier protein signature 135 148 IPR001249 GO:0003989|GO:0006633|GO:0009317
Bva13g03560 175 PRINTS Acetyl-CoA biotin carboxyl carrier protein signature 120 134 IPR001249 GO:0003989|GO:0006633|GO:0009317
Bva13g03560 175 MobiDBLite consensus disorder prediction 51 99 - -
Bva13g03560 175 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED 26 174 - -
Bva13g03560 175 PANTHER BIOTIN CARBOXYL CARRIER PROTEIN OF ACETYL-COA CARBOXYLASE, CHLOROPLASTIC 26 174 - -
Bva13g03560 175 CDD biotinyl_domain 101 173 - -
Bva13g03560 175 ProSiteProfiles Biotinyl/lipoyl domain profile. 98 174 IPR000089 -
Bva13g03560 175 SUPERFAMILY Single hybrid motif 100 174 IPR011053 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03560 Bva-Chr13 24046010 24049784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03560 27 175 Acyl Lipid Metabolism Gene Families AT5G15530 58.642 1.10e-54 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03560 K02160 - ncol:116249616 181.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03560 13 24046010 24049784 Bva13g03560 13 24046010 24049784 ECH