Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03557 ATGAAAGCCCATGATGCTCGTCGTCGAGGAAGAATTCTTTCTGCGGTGGATCTGAGCCTTGGCGGCAATGGACACCCTGCTGAAACTGGGTTGTATTACACAAAACTTCGGATTGGGTCTCCTCCGAAGGACTACCACGTGCAAGTTGATACAGGAAGTGACATTTTGTGGGTAAATTGTGTTGACTGCACGAGATGTCCCAGGACAAGTGATCTTCATATAGAATTGACACTATATGACCCAAAGAGTTCCAGAACTTCACAGTTGGTTTCTTGTGATGATGACTTTTGCTCTTCCACATACGATGGTCCAGTTGCTGGTTGCAAGCCTGGGCTGGGCTGTGACTACAGTGTAATTTATGGAGATGGAAGCGGAACTGCTGGATACTTTGTGAGGGATTATCTTACGTTTGACCAAGTAAATGGCAACCTTCACACCACACCAGCAAATAGCAGTGTGGTTTTTGGGTGTGGAGCTACACAATCTGGGGGATTAAGTTCATCTTCTGAAGAAGCTCTTGATGGAATTCTTGGTTTTGGACAAGCAAATTCATCAGTGCTTTCGCAGCTTGCTGCAGCTGGAAAGgtgaaaaagattttttcaCACTGCCTTGATAATAATCGTGGAGGTGGGATCTTTGCCATAGGGGAGGTGGTGCAGCCAACAGTGACTACAACTCCGTTGGTAGCAAATCAGGCACACTACAATGTGATTTTGAAGGACATTGAGGTAGATAAGGATTTTCTAGAGCTTCCCTCAGATACATTTGCCACTGGAAATGGGCGGGGAACAATAATAGATAGTGGTACAACCTTGGCTTATCTTCCATCTTTGGTTTATGACCCACTAATGAACAAGGTTTTGTCTCGGCAGCCTGGACTGGACATACATATAATTGAAGgccaattttcttgttttcagtACAGTGGAAATGTTGACGATGGATTTCCAACTGTCAAGTTTCATTTTCAGGACTCAGTTTCTTTGACAGTTTATCCGCATGACTACCTGTTCGAGATTAAAGATGCCGTGTGGTGTGTTGGCTGGCAGAAAACTGCATCACAATCTAGGGACGGAAGGGACATAACTCTTCTTGGAGATTTGGTGCTTTCAAACAAACTAGTTGTGTATGATCTTGAAAATATGACCATTGGATGGACGGAATATAATTgTTCTTCCAGCATTAAAGTGAAGGACGAAAGAAATGGAGCTGTATACACAGTTTCTGCACACGATATTTCTTCGTCCCGCGCCGTGTTAATTGGAAGAATactgacattttttttattgctagTTGCCATGCTAAACATCTTGGTTTGCTA 1322 0.4198 MKAHDARRRGRILSAVDLSLGGNGHPAETGLYYTKLRIGSPPKDYHVQVDTGSDILWVNCVDCTRCPRTSDLHIELTLYDPKSSRTSQLVSCDDDFCSSTYDGPVAGCKPGLGCDYSVIYGDGSGTAGYFVRDYLTFDQVNGNLHTTPANSSVVFGCGATQSGGLSSSSEEALDGILGFGQANSSVLSQLAAAGKVKKIFSHCLDNNRGGGIFAIGEVVQPTVTTTPLVANQAHYNVILKDIEVDKDFLELPSDTFATGNGRGTIIDSGTTLAYLPSLVYDPLMNKVLSRQPGLDIHIIEGQFSCFQYSGNVDDGFPTVKFHFQDSVSLTVYPHDYLFEIKDAVWCVGWQKTASQSRDGRDITLLGDLVLSNKLVVYDLENMTIGWTEYNCSSSIKVKDERNGAVYTVSAHDISSSRAVLIGRILTFFLLLVAMLNILVC 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03557 440 SUPERFAMILY Acid proteases 26 395 IPR021109 -
Bva13g03557 440 Pfam Xylanase inhibitor N-terminal 32 216 IPR032861 -
Bva13g03557 440 Gene3D Acid Proteases 218 397 IPR021109 -
Bva13g03557 440 Pfam Xylanase inhibitor C-terminal 234 387 IPR032799 -
Bva13g03557 440 CDD pepsin_A_like_plant 32 391 IPR034161 -
Bva13g03557 440 ProSiteProfiles Peptidase family A1 domain profile. 32 387 IPR033121 -
Bva13g03557 440 PANTHER ASPARTYL PROTEASES 1 408 IPR001461 GO:0004190|GO:0006508
Bva13g03557 440 PRINTS Pepsin (A1) aspartic protease family signature 38 58 IPR001461 GO:0004190|GO:0006508
Bva13g03557 440 PRINTS Pepsin (A1) aspartic protease family signature 363 378 IPR001461 GO:0004190|GO:0006508
Bva13g03557 440 PRINTS Pepsin (A1) aspartic protease family signature 264 275 IPR001461 GO:0004190|GO:0006508
Bva13g03557 440 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 1 408 - -
Bva13g03557 440 Gene3D Acid Proteases 20 217 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03557 Bva-Chr13 24024514 24034180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03557 14 396 Miscellaneous Gene Families AT1G44130 27.820 1.10e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03557 - - gmx:100804123 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03557 13 24024514 24034180 Bva13g03557 13 24024514 24034180 ECH