Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03550 ATGGAGAAAGATGAACCAGGCTACTTTGTTTTGCCGAAACCATCAGATTGGGTGGGGAAACTGATATCCCTCCAAGCGAACTTGATCTACAACTGTTTGATTACTGTCTTTTCCCCCATCTCGTCTCTCCTTTCCATAGCGTCTGAGTCCTACCACCGGGCTGAGGAGACCAAAGACACTGTTGAATCAGCAGTCCACCAAGTCCCCTCCAACATTACTTATGGTAGTGCCCTACTACGAAAGAAGCTGGGATTAGGCTTTCTCAGTGCGGCATATGTGTGCATGGTTCTGATATTGGTTTTTATTCTGGCTATTGTGGTCGGTGTTGGTTTGGTACAGCTGTGGGTGGAGGAACCTGTGTTAGTGAAGGAAAGATTGCATTTTGATTACACTGATGCTCATCCTACAGCTGTGTTTTCATTCGATGGACGAGTTAATGGAATTGTAGGGCACAGCAGGAAGAAGCAGATTGGTATTCCTGTTGGGCACACCTTTTACATTTCTTTGATCCTGGTGATGCCTGAATCCTACTTCAATCGGGAGATGGGGGTGTTTCAGCTGACAGCAGAACTCCTATCAGTTGATGGAGATGTGATAGCAAAATCTAGCCAGCCATGCATGTTGCGGTTTAGAAGCTTTCCGATTCGATTGGCGAGGACATTTGTGATGGGTGTGCCTCTGTTACTGGGAATCTCTGGTGAAACCCAAGAGATAGATGTAGAAATATTGAAGCACAAGGAAGACAACCGAAGAACCAAAGCAGTCAGAGTAACTCTTTGTCCAAGAGCAGGGACTTCATATCTGCCACAGATATATGAAGCTCAAATCGTCATGAACTCCCATCTACCTTGGACCAAAGAATTGGTTCACAGCTGGAAATGGACATTTTATGTGTGGATGTCCTTGTATATCTATATTGTGCTGCTTATAATTCTCTTGTGTTGCTGTAGGCGGCTCATCTTTCTGGTGACACCAGATTATTTCAGTGATGAAAGCGAGGTTACTCATGAAGAACCAATAGAAACAATGGGGAGTGGGAGGGAAGGAGATGAAAGCGAGGTTTCTGAGTTGCTGAGGAAATGGcgaagaagcagaagcaagAGAAAAGCTATCCTTATGCATGGTGGTACTTTTGTGCCAGAAATCATTGGCTCCTCAGCTTCAAGCGTTAGCATGACTAGAGAAGATGCAACCAGTATGGTTGTTGAAGAGGATGTTGAAGACTCTGAATCGGTGTGCTTAGGCTA 1247 0.4427 MEKDEPGYFVLPKPSDWVGKLISLQANLIYNCLITVFSPISSLLSIASESYHRAEETKDTVESAVHQVPSNITYGSALLRKKLGLGFLSAAYVCMVLILVFILAIVVGVGLVQLWVEEPVLVKERLHFDYTDAHPTAVFSFDGRVNGIVGHSRKKQIGIPVGHTFYISLILVMPESYFNREMGVFQLTAELLSVDGDVIAKSSQPCMLRFRSFPIRLARTFVMGVPLLLGISGETQEIDVEILKHKEDNRRTKAVRVTLCPRAGTSYLPQIYEAQIVMNSHLPWTKELVHSWKWTFYVWMSLYIYIVLLIILLCCCRRLIFLVTPDYFSDESEVTHEEPIETMGSGREGDESEVSELLRKWRRSRSKRKAILMHGGTFVPEIIGSSASSVSMTREDATSMVVEEDVEDSESVCLG 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03550 415 Pfam Putative adipose-regulatory protein (Seipin) 98 304 IPR009617 GO:0019915
Bva13g03550 415 PANTHER SEIPIN-1 9 414 - -
Bva13g03550 415 PANTHER BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN 9 414 IPR009617 GO:0019915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03550 Bva-Chr13 23996715 23999783 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03550 K19365 - gmx:100813191 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03550 13 23996715 23999783 Bva13g03550 13 23996715 23999783 ECH