Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03547 ATGGCAACTGCTTCTGCAATGGCCAGCCATAGCCAGCTGAAGTCGAGCTTCACCTCGTCACAAGTCAATAGGGCTCTGCCACCCAAACCCAAGGGTCTCTCCGCCTCTCCTGTGCGACCTAGGACTGGGACTAGGACTAGCTCCTTCGCTGTTAAGGCCATTCAATCTGAAAAGCCAACATTTCAAGTAATTCAGCCCATAAACGGTGATCCATTCATCGGAAGCCTTGAAACCCCAGTCACATCAAGCCCGTTGATCGCCTGGTACCTGTCCAACCTTCCGGCCTATCGGACGGCAGTGAGCCCACTACTGAGAGGTGTTGAGGTGGGCCTAGCCCACGGGTTCCTATTGGTGGGGCCATTTGTAAAGGCTGGGCCGTTGAGGAACACAGAATACGCCGGAGGTGCGGGGGCTCTGGCAGCTGGAGGGCTCGTGGTTATCTTGAGCATTTGCCTTACCATGTATGGAATAGCATCCTTCAAGGAAGGGGACCCGTCCACTGCTCCATCACTCACTTTGACTGGACGCAAGAAGGAACCCGATGAGTTGCAAACTGCCGACGGTTGGGCCAAATTCACCGGCGGCTTCTTCTTCGGAGGCATTTCCGGTGTCATTTGGGCCTACTTCCTCCTTTACGTCCTAAATCTTCCTTACTACTTTAAGTG 665 0.5398 MATASAMASHSQLKSSFTSSQVNRALPPKPKGLSASPVRPRTGTRTSSFAVKAIQSEKPTFQVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEYAGGAGALAAGGLVVILSICLTMYGIASFKEGDPSTAPSLTLTGRKKEPDELQTADGWAKFTGGFFFGGISGVIWAYFLLYVLNLPYYFK 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03547 221 MobiDBLite consensus disorder prediction 1 25 - -
Bva13g03547 221 Gene3D Photosystem I PsaL, reaction centre subunit XI 58 221 IPR036592 GO:0009522|GO:0009538|GO:0015979
Bva13g03547 221 PANTHER PHOTOSYSTEM I PSAL, REACTION CENTRE SUBUNIT XI-RELATED 8 221 - -
Bva13g03547 221 Pfam Photosystem I reaction centre subunit XI 63 214 IPR003757 GO:0009522|GO:0009538|GO:0015979
Bva13g03547 221 SUPERFAMILY Photosystem I reaction center subunit XI, PsaL 64 220 IPR036592 GO:0009522|GO:0009538|GO:0015979
Bva13g03547 221 PANTHER - 8 221 IPR022980 -
Bva13g03547 221 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03547 Bva-Chr13 23988530 23989653 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03547 K02699 - vvi:100242802 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03547 13 23988530 23989653 Bva13g03547 13 23988530 23989653 ECH