Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03541 ATGATAGGGTGGGGAGATGTTTATAAGGTGGTGGTGGCCATGGTACCACTCTACGTTGCTCTGATATTAGGGTACGGATCTGTAAGGTGGTGGCGCATCTTCAGCAGGGAGCAGAGTGATGCCATAAACCGACTGGTGTGCTACTTTACACTCCCACTCTTCACCTTTGAGTTCTCGGCTCACATTGATCCTTTCAACATGAACTTGTTGGTGATTGGTGCTGACACCATATCCAAGTTCATCATCCTCGTGGTGATTGCTTTCTGGGCCAAGTGCACTACCAAAGGAAGCTATTGTTGGTCTATAACAAGCTTCTCTTTGTCTAGTTTAACCAATGCCTTAGTTGTGGGAGTGCCTCTAATGAAGGCCATGTACGGACAATTAGGGGTGGATCTCGTGGTTCAGTTGTCGGTTGTGCAGGCCATCCTATGGctctctctccttctcttcttcttagAATTTCGACGAACAAGAATAGAGGGTATTAACAAAGATGTAGAAGCAACAACAAGTACTGTCCAATCATCAGCTGCCAGTACCGGCGATCACAGTATTCCATTCTGCAAGTTGATGAAGCTTGTGTGGCTCAAACTTGCTACGAATCCAAACTCGTATGGTTGTGTTCTTGGCATTTCTTGGGCCTTCATCTCTAACAGGTGGAACCTGGAGCTGCCAGGTATGGTAGAGGGATCAATACAAATCATGTCGAGGGCTGGGACAGGCACCGCCATGTTTAGCATGGGTATGTTCATGGCACTTCAGGAGAAGGTGATTGCATGTGGAGCGAGCTTGACAGTGGTGGGTATGGTTTTAAGGTTCATAGCGGGACCAGCAGCTATGGCCATCGGTGCAATCGCTGTGGGGTTACGTGGTGATGTTTTAAAAGTCTCTATCATTCAGGCAGCAGTGCCGCAATCCATCACGTCCTTCATTTTCGCTAAAGAATGCGGATTGCACGCAGATGTTCTTAGCACTGCTGTCATCTTTGGTACTATTGCCTCACTTCCTGTCTCCATTGCCTACTATGCACTCTTGGAGTTCGTACATTA 1049 0.4633 MIGWGDVYKVVVAMVPLYVALILGYGSVRWWRIFSREQSDAINRLVCYFTLPLFTFEFSAHIDPFNMNLLVIGADTISKFIILVVIAFWAKCTTKGSYCWSITSFSLSSLTNALVVGVPLMKAMYGQLGVDLVVQLSVVQAILWLSLLLFFLEFRRTRIEGINKDVEATTSTVQSSAASTGDHSIPFCKLMKLVWLKLATNPNSYGCVLGISWAFISNRWNLELPGMVEGSIQIMSRAGTGTAMFSMGMFMALQEKVIACGASLTVVGMVLRFIAGPAAMAIGAIAVGLRGDVLKVSIIQAAVPQSITSFIFAKECGLHADVLSTAVIFGTIASLPVSIAYYALLEFVH 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03541 349 Pfam Membrane transport protein 10 175 IPR004776 GO:0016021|GO:0055085
Bva13g03541 349 Pfam Membrane transport protein 189 342 IPR004776 GO:0016021|GO:0055085
Bva13g03541 349 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 348 - -
Bva13g03541 349 TIGRFAM 2a69: auxin efflux carrier 1 345 IPR014024 -
Bva13g03541 349 PANTHER AUXIN EFFLUX CARRIER COMPONENT 5 1 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03541 Bva-Chr13 23965400 23967290 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03541 1 326 Organic Solute Cotransporters AT5G16530 71.818 5.62e-172 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03541 K13947 - pvy:116107639 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03541 13 23965400 23967290 Bva13g03541 13 23965400 23967290 ECH