Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03540 ATGGCATCGTTGTTTCTTTACCACGTCGTGGGCGATCTGACGGTGGGAAAGCCGGAGTTGGTGGAATTTCACGAAACAGAGACTGTGGAATCGGCGATTCAGGGAATTGGTGAATCATCAGAGCGTAGTTTACCAATCTGGAAGAAGAAATCGCATGTGGGTATGATTGAGAATAGTGAAATGAGACAGCAGAGATTTGTAGGTATCCTTAATTCCTTGGATATAGTTGCATTTTTGGCAAGAAGCGAGTATTTGGAGGATCAGGAAAAGGCCATGAAGACCCCTGTTTCTGAGATTGTCGTTCCAAATAATTCTCTACTGAGGCAGGTTGATCCCGCAACAAGATTGATAGATGCACTGGAGATGATGAAGCACGGTGTGAAACGTCTTCTTGTTCCAAAGAGCGTAGTATGGAGAGGCATGAGTAAGCGATTCTCAATTCTCTACAACGGCAGATGGCTCAAGAATATCGAAACATCCAGCAGCAGCAATTTACCTCTGGGTGGTTCCTCATCTTCCATCACCCGTGATAAGTTCTGCTGTCTTTCAAGAGAAGATGTCCTCCGTTTTATCATTGGTTGCCTTGGAGCTCTAGCACCACTGCCTCTTACCTCTATCTCCTCTCTTGGGGCAATTAATCCAAACTACAAATTTATTGAGTCATCTACTCCGGCCGTCGAAGTAACCTGGAAGCTTCCTGAAGACCCCAGTGCAGTTGCAGTAATAGAAAGCACACTGGATGGTCAGCGCAAGATAATTGGAGAAATTTCTGCATGTAAGTTTTGGCAATGTGATTACTTAGCTGCAGCCTGGGCTTTAGCCAATCTCTCAGCTGGACAGTTTGTAATGGGAGTCGAGGATAATGCTGCCTCAAGGACACTGGCAGAGTTGTGTTTAAATTCAACAGTCGGCGATAATAATGTAGCTAGTGGTGGTGGTTCAAGAAGACCAAAGAAATTCAGTAGCCGGAGTATTGGGTTCTTTAGTAATCCTGCTAGCCATGGTCTTGTTGGTGTCAGTAGGAGCATGTACAGGGGTAGGAGTGCGCCTTTGACATGCAAAGTTAATAGTTCATTGGCAGCTGTGATGGCGCAGATGCTATCGCACAGGGCAACTCAAGTGTGGGTGACGGAGGAAGAGGATGATGATGTTTTGGTTGGCGTGGTGGGATTTGCTGATGTTTTGATTGCTGTAACCAAACAACCAGCAGCCTTTATACCTGCAAATAAATCTGCCGAGGCGTTTGGAAATGATTGTCAGAGTtg 1265 0.4553 MASLFLYHVVGDLTVGKPELVEFHETETVESAIQGIGESSERSLPIWKKKSHVGMIENSEMRQQRFVGILNSLDIVAFLARSEYLEDQEKAMKTPVSEIVVPNNSLLRQVDPATRLIDALEMMKHGVKRLLVPKSVVWRGMSKRFSILYNGRWLKNIETSSSSNLPLGGSSSSITRDKFCCLSREDVLRFIIGCLGALAPLPLTSISSLGAINPNYKFIESSTPAVEVTWKLPEDPSAVAVIESTLDGQRKIIGEISACKFWQCDYLAAAWALANLSAGQFVMGVEDNAASRTLAELCLNSTVGDNNVASGGGSRRPKKFSSRSIGFFSNPASHGLVGVSRSMYRGRSAPLTCKVNSSLAAVMAQMLSHRATQVWVTEEEDDDVLVGVVGFADVLIAVTKQPAAFIPANKSAEAFGNDCQS 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03540 421 CDD CBS_pair_SF 23 132 - -
Bva13g03540 421 Gene3D - 334 400 IPR046342 -
Bva13g03540 421 Gene3D - 1 136 IPR046342 -
Bva13g03540 421 Pfam CBS domain 349 397 IPR000644 -
Bva13g03540 421 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 1 409 - -
Bva13g03540 421 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX6 1 409 - -
Bva13g03540 421 SUPERFAMILY CBS-domain pair 340 401 IPR046342 -
Bva13g03540 421 ProSiteProfiles CBS domain profile. 343 405 IPR000644 -
Bva13g03540 421 SUPERFAMILY CBS-domain pair 5 133 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03540 Bva-Chr13 23960291 23963603 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03540 - - vri:117912511 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03540 13 23960291 23963603 Bva13g03540 13 23960291 23963603 ECH