Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03539 ATGGGACGAACATTAATTTCCGTCATCTGCTCCTCAGACGCCCTCAAATTTAGATTGCATCCTCTAACACTCGTGTGTTTGATTCTTGTATGCACAAGCCCTTGTGAGTCAGTTGATACTGACATCGACCCAGATGACGAAGCCTCGCTTTTATTATTCAGGTCATGGGTGCAATATCCCAACCAGAGATTGCCAAACTGGGTCGGGTCTAACTGCACCAACTGGACCGGAATCACCTGTGACACCCGGACCGGCCGAGTGGTTTCCATCAACTTGACCAGTATGAACTTGTCGGGCCAAATTCACCCAAGTTTCTGCCATCTTTCATATCTTGAAACCCTGGTTTTATCCCACAATAACTTTACATGTCCTTTCCCAGTCTGTTTTGGAAGTATGCTTAATCTCAGAATTATTGATCTCAGTCACAATCAATTTCATGGTGGAATACCAGAGTCTTTGATGAGGCTTAAGCACCTCACTCAGCTTGTTTTGAATGGGAATCAAGGTTTGGGAGGTCCATTGCCTGCCTGGATTGGCAATTTCTCTTCCAATTtagaaaaacttgatttgggTCTTAATTCATTTAGCGGGCAAATTCCTGAAAGCTTGCTTTACTTGAAATCCCTCAAGTATTTGCATCTTGAAAGCAATTATTTATCTGGTAACTTAAATGATTTTCACCAGTCTATGGTTTTTCTGAATCTGGCTTCCAATAAGTTTTCAGGGGGCCTACCGGAATGTATTGCTTCCTTTAGTGCTTTAACCTATCTAAACCTTTCATTTAACCATTTGAAGTATAAGCTGTCCCCAAGGCTTGTGTTCTCTGAGAAGCTTCTTGCTTTGGATTTGAGTAATAACGATTTTTCTGGTCCTATTCCTAGTAAAATTGCAGAGTCGACGGATAAACTGGGCCTTGTGTCTCTTGACCTTTCTCATAATCAATTCTCTGGTGAAATCCCGTTGAAAATTACAGAATTGAAAAGTTTGCAGGCTTTATTCCTTTCTCACAATCATCTTTCTGGAGAAATTCCTGCTAGGATTGGAAATTTGACTTACCTCCAAGTCATTGATCTCTCACACAACTCTTTGTCCGGTACCATTCCGTTAAATATTGTTGGGTGCTTTCAACTGCTTGCTTTAATTCTCAATAACAACAATCTTTCTGGTGTAATTCAACCGGAGTTTGATGCATTGGATAGCCTGAAGATACTGGATATAAGCAACAACAGGTTTTCTGGTGAGATCCCACTCACTTTGGCGGGTTGTAAATCTCTGGAGATTGTAGATTTCAGTTTCAATGATCTCTCTGGATCCTTGAATGACGCAATAATCAAATGGACAAACCTCAGGTATCTGTCTCTAGCCCACAACAAATTTGTTGGAGCTCTACCTAGTTGGTTGTTCACGTTTGAAGCAATAGAAATGATGGATTTGTCTGGCAACAAATTTTCTGGCTTCATACCTGATGCTAATTTTAAGGGTGGCTTGTTCGTTAACAAGCGAGATATCACTGTTAAAGAGCCATTTATTGCGGCAAGAAATTTGCAACTGAAAAGTTCAGTGGTTGTTGCTGATAGCAATGAGTCCAGCTTCACTTATGTTCTTTCCTCAATGGTTGGAATTGATTTATCTGACAATATGCTACACGGGGAGATTCCAAGGGGTCTATTTGGACTCAGAGGCTTAGAATATCTCAATTTGTCACGCAACTTTCTTGATGGACAGGTTCCGGGTTTGCAGAAAATGCTAAGTTTAAGAGCCTTAGATTTGTCTCATAATTCCTTATCAGGTCAGATCCCGGGAAACATTTCTATACTTCAAGATCTGGCTCTCTTGAATTTGTCCTATAACTGTTTTTCGGGATACGTACCTAAGAAACAGGGGTATGGGAGGTTTCCAGGGGCATTTGCTGGAAATCCAGATTTGTGCTTGGAGTCTTCCAATGGAGAATGTGACAGTGACACTGCTAGGAATCCATCAGAACAGGGAAGATCTTCTAAGGAAGACATGATGGATGGACCAATATCCGTTGGCGTATTTTTTATAAGCGCCTTCAttagttttgattttggaaTCATTGGACTGTTCTGTTCTTCTCGGGCAAGAAGTTTCATTCTTCAGACGAAAGTTTG 2132 0.4048 MGRTLISVICSSDALKFRLHPLTLVCLILVCTSPCESVDTDIDPDDEASLLLFRSWVQYPNQRLPNWVGSNCTNWTGITCDTRTGRVVSINLTSMNLSGQIHPSFCHLSYLETLVLSHNNFTCPFPVCFGSMLNLRIIDLSHNQFHGGIPESLMRLKHLTQLVLNGNQGLGGPLPAWIGNFSSNLEKLDLGLNSFSGQIPESLLYLKSLKYLHLESNYLSGNLNDFHQSMVFLNLASNKFSGGLPECIASFSALTYLNLSFNHLKYKLSPRLVFSEKLLALDLSNNDFSGPIPSKIAESTDKLGLVSLDLSHNQFSGEIPLKITELKSLQALFLSHNHLSGEIPARIGNLTYLQVIDLSHNSLSGTIPLNIVGCFQLLALILNNNNLSGVIQPEFDALDSLKILDISNNRFSGEIPLTLAGCKSLEIVDFSFNDLSGSLNDAIIKWTNLRYLSLAHNKFVGALPSWLFTFEAIEMMDLSGNKFSGFIPDANFKGGLFVNKRDITVKEPFIAARNLQLKSSVVVADSNESSFTYVLSSMVGIDLSDNMLHGEIPRGLFGLRGLEYLNLSRNFLDGQVPGLQKMLSLRALDLSHNSLSGQIPGNISILQDLALLNLSYNCFSGYVPKKQGYGRFPGAFAGNPDLCLESSNGECDSDTARNPSEQGRSSKEDMMDGPISVGVFFISAFISFDFGIIGLFCSSRARSFILQTKV 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03539 710 PRINTS Leucine-rich repeat signature 353 366 - -
Bva13g03539 710 PRINTS Leucine-rich repeat signature 582 595 - -
Bva13g03539 710 SUPERFAMILY L domain-like 44 297 - -
Bva13g03539 710 Gene3D Ribonuclease Inhibitor 45 154 IPR032675 -
Bva13g03539 710 Gene3D Ribonuclease Inhibitor 228 301 IPR032675 -
Bva13g03539 710 Gene3D Ribonuclease Inhibitor 302 374 IPR032675 -
Bva13g03539 710 PANTHER 3, PUTATIVE-RELATED 20 710 - -
Bva13g03539 710 Gene3D Ribonuclease Inhibitor 155 227 IPR032675 -
Bva13g03539 710 Pfam Leucine rich repeat 110 168 IPR001611 GO:0005515
Bva13g03539 710 SUPERFAMILY RNI-like 233 619 - -
Bva13g03539 710 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 20 710 - -
Bva13g03539 710 Pfam Leucine rich repeat N-terminal domain 44 81 IPR013210 -
Bva13g03539 710 SMART LRR_typ_2 535 559 IPR003591 -
Bva13g03539 710 SMART LRR_typ_2 326 350 IPR003591 -
Bva13g03539 710 SMART LRR_typ_2 398 422 IPR003591 -
Bva13g03539 710 SMART LRR_typ_2 446 470 IPR003591 -
Bva13g03539 710 SMART LRR_typ_2 251 275 IPR003591 -
Bva13g03539 710 SMART LRR_typ_2 582 606 IPR003591 -
Bva13g03539 710 SMART LRR_typ_2 132 156 IPR003591 -
Bva13g03539 710 MobiDBLite consensus disorder prediction 648 670 - -
Bva13g03539 710 Pfam Leucine Rich Repeat 400 422 IPR001611 GO:0005515
Bva13g03539 710 Pfam Leucine Rich Repeat 584 602 IPR001611 GO:0005515
Bva13g03539 710 Gene3D Ribonuclease Inhibitor 375 507 IPR032675 -
Bva13g03539 710 Gene3D Ribonuclease Inhibitor 535 643 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03539 50 647 Receptor kinase-like Gene Family AT2G25790 34.903 4.04e-73 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03539 - - gmx:100814791 1048.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03539 13 23954668 23957725 Bva13g03539 13 23954668 23957725 ECH