Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03518 ATGGTCTTATCCGCTAGACCATGCGACGGCGCGTTTCTCTATTTCCCCCCGGCAGTTGCACGCATCAATGAGAACATCATTTCTTGCGCGCCTCCATTCTTGCACTGTATTAGGTATGCCACGAGGTTACTTTTGAGTGGAAAGCCCAAATATTTGAAACTGTTGAGAGCATACAAGCATGATTTCAGTTCAGGGTCAAGATATTCAACGTTGCCTCCACAACATAAACCGGATATTCCCACTTTAGCACGAACTCCTCTTACAAATATACCACAGATATTTCAATCCCTGGTTGATAGAATGCTCGTTTTTCTCAAAGACTGGAGTAGTCATTTACGCCTCATAGAAGTAGCTGGTATATTGTTATGCATTTTAATGATCGCTCCATCCGCCGACGCTGTTGATGCTCTCAAAACTTGTGCTTGCTTATTGAAGGAATGCAGGATTGAACTGGCCAGGTGTATCTCAAATCCATCATGTGCTGCCAATGTTGCTTGTCTTCAAACTTGCAACAATCGGCCTGATGAAACTGAATGCCAAATTAGATGTGGGGACATCTTTGAAAACAGTGTGGTTGATGAGTTCAACGAGTGTGCAGTATCACGGAAGAAATGTGTACCAATGAAATCTGACGTGGGAGAATTTCCTATTCCAAATCCTGAAGTCCTTGTTAAGAGCTTTAACATTGCTGATTTTAATGGGAAATGGTTCATCAGTAGTGGCTTAAATCCtacatttgatatttttgactGCCAATTGCATGAATTCCACACTGAATCCAACAAACTTGTGGCTAACTTGTCATGGAGAGTAGGAACTCCAGATGGGGGATTTATTACCAGATCAACCATACAGAAATTTGTGCAAGATCCTTCTCAGTCTGGAATACTCTACAATCATGATAATGAGTACCTTCACTATCAGGATGACTGGTACATTCTGTCATCCAAGATTGAGAACAAAAACGATGACTACATATTTGTCTACTACCGAGGTAGAAACGATGCTTGGGATGGCTATGGTGGTGCTGTTGTGTACACAAGAAGTTCTGTTTTGCCTGAAACTATAGTTCCTGAACTTGAAAAGGCAGCTAAGAGTGTAGGAAGAGACTTTAGTAAGTTCATCAAAACAGATAATACTTGTGGACCGGAGCCTTCCCTGGTAGAGAGGCTGgagaaaaaagttgaagagGGAGAGCAGAGCATTGTGAGGGAAGTTGAAGAGTTAGAAGAAGAGGTAGAGAAGGTGGGGAAAACAGAGATGACCTTATTTCAGAGGCTGGCTGAAGGTTTTAAAGTGCTCCAACAAGATGAGGAAAATTTCTTACGAGGTCTGTCAAAAGAAGAGATGGACATACTGAGCGAGCTTAAAATGGAAGCGAGCGAAGTAGAAAAGCTCTTTGGCCGTACTTTGCCATTGAGGAAACtaagata 1433 0.4124 MVLSARPCDGAFLYFPPAVARINENIISCAPPFLHCIRYATRLLLSGKPKYLKLLRAYKHDFSSGSRYSTLPPQHKPDIPTLARTPLTNIPQIFQSLVDRMLVFLKDWSSHLRLIEVAGILLCILMIAPSADAVDALKTCACLLKECRIELARCISNPSCAANVACLQTCNNRPDETECQIRCGDIFENSVVDEFNECAVSRKKCVPMKSDVGEFPIPNPEVLVKSFNIADFNGKWFISSGLNPTFDIFDCQLHEFHTESNKLVANLSWRVGTPDGGFITRSTIQKFVQDPSQSGILYNHDNEYLHYQDDWYILSSKIENKNDDYIFVYYRGRNDAWDGYGGAVVYTRSSVLPETIVPELEKAAKSVGRDFSKFIKTDNTCGPEPSLVERLEKKVEEGEQSIVREVEELEEEVEKVGKTEMTLFQRLAEGFKVLQQDEENFLRGLSKEEMDILSELKMEASEVEKLFGRTLPLRKLR 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03518 477 PANTHER VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC 87 477 - -
Bva13g03518 477 Gene3D - 210 392 IPR012674 -
Bva13g03518 477 PANTHER VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC-RELATED 87 477 IPR044682 GO:0010028|GO:0046422
Bva13g03518 477 SUPERFAMILY Lipocalins 217 385 IPR012674 -
Bva13g03518 477 CDD lipocalin_VDE 211 385 - -
Bva13g03518 477 Coils Coil 388 419 - -
Bva13g03518 477 Pfam VDE lipocalin domain 139 379 IPR010788 GO:0046422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03518 K09839 - gmx:100778118 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03518 13 23875248 23878119 Bva13g03518 13 23875248 23878119 ECH