Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03515 ATGAACCCGAATCCATCTGTTCCACATCCCACTCCCAGTACATCCATCGCCTACCTCTCCTCTAACCCTAATTTCATCAATCCCAACTCTAACCTCTCATCCCTCAATAAGCTAGTACAGCTTTCCCACGATACCCTTGGGTCTCTTGCCGGTTTGGTAACGCCTCTAAAATCACAAACTCCAAATGAGAATCTCATACAATGCCCTTTCGATCCCCGCCACATTATGCCTCCTCACTCCCTCTTCCTTCACTACCTCCGTTGCCCTTCCTCTCCTCGCCCTCTTCGTAATCTCAATGACCTCCTCCAATCCCTAACTTACCCTAAAACCCTCAAGTCCTCTGATGGATCGCACCACAATAATCTTTTCCTGCACACACTAGATGATCCTGCTGCTGAACTCTGTTTCTCTTTGGACGATTACGTCCACTCGGGTTTCAACTTTTTCTACCGTGACTGCCCTGGCGTCGTTACTTCGTCCTATGCAGATGCTACCAACAACAGGACATTTACACTTCCTGGTTTTTTATCAGTTGAATGTTCGAACTTCATAGGCGCTAGTGATACTGATACAGACACTACAAATCCTCAGAGAGTGCTTTTGCGAATATTTCCTTCTGAGTATTGGACTATTAGAAATGAAGTCCAAGCTTGGAATGATTATCCAGTTACATACTCGTACGGTGTTATTCGTGCAATTTCAGGTGTCAGAATTGCTAAGGGATGTAATTTATTGACATGGATAATAGCAAATTCACCTCGTTTTGGTGTTATAATTGATATAGCTATGCAACAGCATATATTTTTGCTATTTAGTTTATGTTTGAAGTCCATTCTAAGAGAAGCCTCAAGTCTGATGGACGTGTTAACGAAAGAACAAACTATGGACTCAAATTTGGCTGCTATGAGTACTAGATGTCCCATCATGCTTCAGGCCTTAACATGGTTAGGATCTCAGCTTTCTATTCTGTACGGTGCGACAAACGGAAAGCTTTTTGTTCTCCATTTGCTTAAGCTTTGCATCTTAGATGGTGCATCATGTCTgctattatttccttttgagCAAAAGTTTACAGAAGCTACTGGTTTAAGAGAGGAGTTTCAGAATTCAGATACAAGCGACAATGATGTGAAATTCGATCTTCCAGTGGAACAAAATGCGGACGCTCGACAGGATAACAATGAGGATGGAACTGTTTGTAGtagaaaaatttttgtatccCAAGTTGCGGCAGCTATTGCAGCATTGCATGAGCGGTCCATTCTTGAAGATAGAATTAAAGGATTATGGTTTTCTCAGCATCCAACTAGATACCAGCTGCTTGCTGAGCATTGTTATGTGTCTGAGAAAGCTAAcgaggagagaaaaaagagaccTGATTATAGACCTGTAATTGATCATGATGGGCTTGCTCGGCAACAATCATGTAAACAGGACTCATCTAAGGAAAAGACACGAGAGGAGCTACTAGCTGAAGAAAGGGATTACAAACGTAGAAGAATGTCATATCGTGGAAAGAAGATAAAGCGATCGGCTTTACAGGTGACGAGGGATATAATAGAGGATTATATGGAGGAAATCAAGCAGGCTGGAGGTATTGGGGCTCAAGTGAAGGAATCTCAAGAGAGGGAGACATTTCCATCTAATGCATATTCTGGCCATGGAAAAATCACTATTGAAGCtaagaatttaagaaaagtAGATCATGACTCACCTGAAGCATCGGCGTGTATTCCAAGTTATTATGAGCAACAATCACACACTAACTATTGTGACAAAAGAAAGGCTGTCAAGGATGACTTTTCTAGAGATTATGCTCAATCCAGACatgaaaaatacaagaaacatGGCTTTGCTGAAGATCAATGGAGTACAGATGATGAATATGATAGAGAGTATGCTTCTAGAAGCACTGAAAGAAACAGAAGTCATAGCCGGTCTCATGATCATAGTCGCCATCGTATGAAACAAGACTATTCAATTAAGAATTATGATCAGAAGTCCAGATCCAGTGATAGGCGGCGAAGTTACATGCACAAGAATCAGGGTTCTGCTTCTCCCTTAAAAAATGCATTTGAAGATAGATATGATCCTTCAGAATCTACTGACATTTGCGATGATGATATTTCCTCTAGTACCAAGTATAGCAAGCCAGTTAAATTCTACGATGAGAAATTCCATTA 2183 0.3981 MNPNPSVPHPTPSTSIAYLSSNPNFINPNSNLSSLNKLVQLSHDTLGSLAGLVTPLKSQTPNENLIQCPFDPRHIMPPHSLFLHYLRCPSSPRPLRNLNDLLQSLTYPKTLKSSDGSHHNNLFLHTLDDPAAELCFSLDDYVHSGFNFFYRDCPGVVTSSYADATNNRTFTLPGFLSVECSNFIGASDTDTDTTNPQRVLLRIFPSEYWTIRNEVQAWNDYPVTYSYGVIRAISGVRIAKGCNLLTWIIANSPRFGVIIDIAMQQHIFLLFSLCLKSILREASSLMDVLTKEQTMDSNLAAMSTRCPIMLQALTWLGSQLSILYGATNGKLFVLHLLKLCILDGASCLLLFPFEQKFTEATGLREEFQNSDTSDNDVKFDLPVEQNADARQDNNEDGTVCSRKIFVSQVAAAIAALHERSILEDRIKGLWFSQHPTRYQLLAEHCYVSEKANEERKKRPDYRPVIDHDGLARQQSCKQDSSKEKTREELLAEERDYKRRRMSYRGKKIKRSALQVTRDIIEDYMEEIKQAGGIGAQVKESQERETFPSNAYSGHGKITIEAKNLRKVDHDSPEASACIPSYYEQQSHTNYCDKRKAVKDDFSRDYAQSRHEKYKKHGFAEDQWSTDDEYDREYASRSTERNRSHSRSHDHSRHRMKQDYSIKNYDQKSRSSDRRRSYMHKNQGSASPLKNAFEDRYDPSESTDICDDDISSSTKYSKPVKFYDEKFH 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03515 727 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 48 KDA PROTEIN 1 701 IPR032845 -
Bva13g03515 727 MobiDBLite consensus disorder prediction 452 467 - -
Bva13g03515 727 Pfam U11-48K-like CHHC zinc finger 65 89 IPR022776 -
Bva13g03515 727 MobiDBLite consensus disorder prediction 633 714 - -
Bva13g03515 727 PANTHER UNCHARACTERIZED 1 701 - -
Bva13g03515 727 MobiDBLite consensus disorder prediction 652 679 - -
Bva13g03515 727 ProSiteProfiles Zinc finger CHHC U11-48K-type profile. 65 92 IPR022776 -
Bva13g03515 727 MobiDBLite consensus disorder prediction 452 488 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03515 K13156 - gmx:100803944 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03515 13 23861018 23866015 Bva13g03515 13 23861018 23866015 ECH