Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03514 ATGATCTCTGTGCAGGGAGACCGCCTCCATCAACACCAGCCGCAGTTGCCTGGTTCTTCCGGGATATCTCGCCCTCCCTTCACCGCAGATCGGGTTGAACCATTCGCTGTCAAGCCCGAGCCTGCATCTCTTAGTCTACTCCCATTACAGGCTCATGATTCTAATGAAGTTGATGAAGATTTGCACATATCTCTTGCTCATCAAATGTACAAGACTGGAAATTATAAACAAGCTCTGGAGCATAGCAACACTGTCTACGAGAGAAGTCAACTACGCACTGACAATCTACTACTTCTGGGTGCCATTTATTACCAGTTACATGATTTTGATATGTGTATtgcaaaaaatgaagaagcacTTCGTATTGAGCCCCATTTTGCTGAGTGTTATGGGAACATGGCAAATGCATGGAAGgaaaaaggaaacattGATCTGGCAATTCGTTACTACTTGATTGCCATTGAGCTTCGTCCCAATTTTGCGGATGCATGGTCAAACTTAGCTAGTGCATATATGCGCAAAGGAAGACTCACTGAAGCTGCACAATGCTGTCGCCAAGCACTTGCTTTAAATCCTCTAAtgGTCGATGCCCATAGCAACTTGGGGAATCTAATGAAAGCTCAGGGATTGGTACAAGAAGCATACAGTTGCTACCTTGAGGCGCTGCGTATTCAACCCACTTTTGCTATTGCATGGTCAAATCTTGCTGGTCTATTTATGGAGTCTGGTGATTTCAATAGAGCCCTTCAGTATTACAAGGAAGCTGTGAAACTTAAACCTTCCTTTCCTGATGCATATCTGAACCTTGGTAACGTATACAAGGCTCTAGGAATGCCTCAAGAGGCTATTGCATGTTACCAACGTGCTCTTCAGACACGGCCAAACTATGCTATGGCTTATGGTAATTTGGCTAGTACATATTATGAGCAAGGCCAACTGGACATGGCAATTCTGCATTATAAGCAAGCTGTCACATGTGATCCAAGATTTTTGGAGGCTTACAACAATTTGGGTAATGCACTGAAAGATGTTGGCCGAGTGGAAGAAGCAACCCAGTGCTACAATCAATGCCTTGCATTACAACCCAACCACCCACAAGCGCTGACCAATCttgggaatatatatatggaatgGAACATGATTGCTGCTGCGGCTTCTTATTACAAGGCCACGTTGAGCGTAACCACTGGATTATCTGCTCCCTTTAACAATCTTGccataatttataaacagCAGGGGAATTACGCAGATGCCATATCATGTTACAATGAAGTTCTTCGCATTGATCCCTTGGCAGCTGATGGGCTTGTAAATAGGGGCAATACATATAAGGAGATCGGTAGAGTTAGTGAAGCTATCCAAGACTATATTCGTGCAATTGCTGTCAGGCCTACTATGGCAGAAGCCCATGCTAATTTGGCTTCAGCCTACAAAGATAGTGGACATGTAGAGGCTGCTATAAAAAGCTATAGACAGGCATTGATTCTTCGTCCGGACTTTCCAGAAGCAACTTGCAATCTTTTACATACACTTCAGTGTGTTTGCAGCTGGGAAGGTCGTGATAAAATGTTCCATGAAGTTGAAGGGATCATCAGGAGGCAGATCAATATGTCAGTCCTTCCTAGTGTTCAGCCTTTCCATGCAATAGCCTATCCGCTTGATCCGATGCTTGCTCTGGATATCAGCCGTAAATATGCTGCTCACTGCTCCTTAATTGCATCTCGGTTTACTGTTCCTCCATTTAACCATCCCGCCCGTATTCCAATCAAGCGTGAGGGTGGATATGATAGACTAAGGATCGGTTATGTGAGTAGTGACTTTGGCAATCACCCTTTGTCACACCTCATGGGATCTGTCTTTGGTATGCACAACCGGAAGAATGTTGAGGTCTTTTGCTATGCCTTGAGTCCGAATGATGGTACGGAATGGAGACAGCGTATTCAGTCTGAAGCAGAGCACTTCGTGGATGTATCTGCCATGTCATCAGATATGATAGCCAAAATGATTAATGAGGATAAGATACATATACTTGTCAATCTTAATGGTTATACAAAGGGTGCTCGAAATGAGATATTTGCTATGCAGCCTGCACCAATTCAAGTTTCCTATATGGGGTTCCCTGGAACCACAGGGGCTACGTACATAGATTACTTGGTCACTGATGAGTTTGTTTCGCCATTACGTTATGCACATATCTATTCTGAAAAGCTCATCCATCTTCCTCATTGTTACTTTGTAAATGATTATAAACAGAAAAATATGGATGTGTTAGATCCGAAGTGCCAGCATAAACGATCAGATTATGGTCTTCCTGaggataaatttatatttgcatGCTTTAATCAGTTGTACAAGATGGATCCTGAAATACTCAATACATGgTGCAATATTCTTAAACGTGTACCCAACAGTGCGCTTTGGCTCCTGAGATTCCCTGCTGCAGGAGAAATGCGATTGAGAGCATATGCTGTCGCTCAAGGGGTGCAGCCAGATCAAATCATTTTCACAGATGTTGCCATGAAGAATGAGCATATTAGACGAAGTGCTTTAGCAGATTTATTCCTTGACACGCCGTTGTGTAATGCACATACAACCGGAACAGATATCTTATGGGCCGGTTTACCAATGATTACCCTGCCTCTTGAGAAAATGGCCACTAGAGTTGCTGGGTCACTCTGTCTTTCTACTGGACTTGGGGAGGAAATGATTGTTAGCGACATGAAGGAGTATGAAGAGAGGGCAGTATCACTGGCTTTGAATCGCCCGAAGCTTCAAGCTCTTACTAATAAGCTGAAAGCTGTCCGCATGACTTGCCCTCTATTTGACACAGCTCGCTGGGTAAGGAATCTCGAGAgaggatattttaaaatgtggaATCTGCATTGCTCCGGCCAACGTCCGCAACACTTCAAAGTTACTGAGAATGACCTTGAGTGTCCTTATGACAGATA 2951 0.4243 MISVQGDRLHQHQPQLPGSSGISRPPFTADRVEPFAVKPEPASLSLLPLQAHDSNEVDEDLHISLAHQMYKTGNYKQALEHSNTVYERSQLRTDNLLLLGAIYYQLHDFDMCIAKNEEALRIEPHFAECYGNMANAWKEKGNIDLAIRYYLIAIELRPNFADAWSNLASAYMRKGRLTEAAQCCRQALALNPLMVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDFNRALQYYKEAVKLKPSFPDAYLNLGNVYKALGMPQEAIACYQRALQTRPNYAMAYGNLASTYYEQGQLDMAILHYKQAVTCDPRFLEAYNNLGNALKDVGRVEEATQCYNQCLALQPNHPQALTNLGNIYMEWNMIAAAASYYKATLSVTTGLSAPFNNLAIIYKQQGNYADAISCYNEVLRIDPLAADGLVNRGNTYKEIGRVSEAIQDYIRAIAVRPTMAEAHANLASAYKDSGHVEAAIKSYRQALILRPDFPEATCNLLHTLQCVCSWEGRDKMFHEVEGIIRRQINMSVLPSVQPFHAIAYPLDPMLALDISRKYAAHCSLIASRFTVPPFNHPARIPIKREGGYDRLRIGYVSSDFGNHPLSHLMGSVFGMHNRKNVEVFCYALSPNDGTEWRQRIQSEAEHFVDVSAMSSDMIAKMINEDKIHILVNLNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGATYIDYLVTDEFVSPLRYAHIYSEKLIHLPHCYFVNDYKQKNMDVLDPKCQHKRSDYGLPEDKFIFACFNQLYKMDPEILNTWCNILKRVPNSALWLLRFPAAGEMRLRAYAVAQGVQPDQIIFTDVAMKNEHIRRSALADLFLDTPLCNAHTTGTDILWAGLPMITLPLEKMATRVAGSLCLSTGLGEEMIVSDMKEYEERAVSLALNRPKLQALTNKLKAVRMTCPLFDTARWVRNLERGYFKMWNLHCSGQRPQHFKVTENDLECPYDR 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03514 983 Pfam Tetratricopeptide repeat 265 326 - -
Bva13g03514 983 ProSiteProfiles TPR repeat region circular profile. 399 430 - -
Bva13g03514 983 ProSiteProfiles TPR repeat profile. 263 296 IPR019734 GO:0005515
Bva13g03514 983 PANTHER UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE SEC ISOFORM X1-RELATED 18 983 - -
Bva13g03514 983 ProSiteProfiles TPR repeat profile. 195 228 IPR019734 GO:0005515
Bva13g03514 983 ProSiteProfiles TPR repeat profile. 467 500 IPR019734 GO:0005515
Bva13g03514 983 ProSiteProfiles TPR repeat profile. 297 330 IPR019734 GO:0005515
Bva13g03514 983 Pfam TPR repeat 440 481 - -
Bva13g03514 983 Gene3D Tetratricopeptide repeat domain 302 335 IPR011990 GO:0005515
Bva13g03514 983 Gene3D Tetratricopeptide repeat domain 166 198 IPR011990 GO:0005515
Bva13g03514 983 Gene3D Tetratricopeptide repeat domain 471 573 IPR011990 GO:0005515
Bva13g03514 983 Gene3D Tetratricopeptide repeat domain 131 165 IPR011990 GO:0005515
Bva13g03514 983 Gene3D Tetratricopeptide repeat domain 199 234 IPR011990 GO:0005515
Bva13g03514 983 Gene3D Tetratricopeptide repeat domain 438 470 IPR011990 GO:0005515
Bva13g03514 983 Gene3D Tetratricopeptide repeat domain 399 437 IPR011990 GO:0005515
Bva13g03514 983 ProSiteProfiles TPR repeat region circular profile. 263 295 - -
Bva13g03514 983 MobiDBLite consensus disorder prediction 1 22 - -
Bva13g03514 983 PANTHER UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE 110 KDA SUBUNIT 18 983 IPR037919 GO:0006493|GO:0016757
Bva13g03514 983 ProSiteProfiles TPR repeat region circular profile. 161 192 - -
Bva13g03514 983 ProSiteProfiles TPR repeat profile. 229 262 IPR019734 GO:0005515
Bva13g03514 983 Gene3D Glycogen Phosphorylase B; 765 937 - -
Bva13g03514 983 ProSiteProfiles TPR repeat profile. 127 160 IPR019734 GO:0005515
Bva13g03514 983 ProSiteProfiles TPR repeat region circular profile. 467 499 - -
Bva13g03514 983 ProSiteProfiles TPR repeat profile. 399 432 IPR019734 GO:0005515
Bva13g03514 983 Pfam Glycosyl transferase family 41 764 950 IPR029489 -
Bva13g03514 983 Pfam Glycosyl transferase family 41 514 752 IPR029489 -
Bva13g03514 983 Gene3D Tetratricopeptide repeat domain 235 301 IPR011990 GO:0005515
Bva13g03514 983 ProSiteProfiles TPR repeat profile. 331 364 IPR019734 GO:0005515
Bva13g03514 983 MobiDBLite consensus disorder prediction 1 24 - -
Bva13g03514 983 ProSiteProfiles TPR repeat profile. 161 194 IPR019734 GO:0005515
Bva13g03514 983 Gene3D - 585 764 - -
Bva13g03514 983 SMART sel1 297 328 IPR006597 -
Bva13g03514 983 SMART sel1 127 158 IPR006597 -
Bva13g03514 983 SMART sel1 263 294 IPR006597 -
Bva13g03514 983 SMART sel1 229 260 IPR006597 -
Bva13g03514 983 SMART tpr_5 297 330 IPR019734 GO:0005515
Bva13g03514 983 SMART tpr_5 93 126 IPR019734 GO:0005515
Bva13g03514 983 SMART tpr_5 263 296 IPR019734 GO:0005515
Bva13g03514 983 SMART tpr_5 229 262 IPR019734 GO:0005515
Bva13g03514 983 SMART tpr_5 365 398 IPR019734 GO:0005515
Bva13g03514 983 SMART tpr_5 127 160 IPR019734 GO:0005515
Bva13g03514 983 SMART tpr_5 195 228 IPR019734 GO:0005515
Bva13g03514 983 SMART tpr_5 433 466 IPR019734 GO:0005515
Bva13g03514 983 SMART tpr_5 399 432 IPR019734 GO:0005515
Bva13g03514 983 SMART tpr_5 331 364 IPR019734 GO:0005515
Bva13g03514 983 SMART tpr_5 161 194 IPR019734 GO:0005515
Bva13g03514 983 SMART tpr_5 467 500 IPR019734 GO:0005515
Bva13g03514 983 Gene3D Tetratricopeptide repeat domain 47 130 IPR011990 GO:0005515
Bva13g03514 983 ProSiteProfiles TPR repeat profile. 433 466 IPR019734 GO:0005515
Bva13g03514 983 Pfam Tetratricopeptide repeat 332 364 IPR001440 GO:0005515
Bva13g03514 983 Pfam Tetratricopeptide repeat 229 262 IPR001440 GO:0005515
Bva13g03514 983 Pfam Tetratricopeptide repeat 402 430 IPR001440 GO:0005515
Bva13g03514 983 Pfam Tetratricopeptide repeat 161 192 IPR001440 GO:0005515
Bva13g03514 983 Pfam Tetratricopeptide repeat 127 159 IPR019734 GO:0005515
Bva13g03514 983 ProSiteProfiles TPR repeat profile. 93 126 IPR019734 GO:0005515
Bva13g03514 983 ProSiteProfiles TPR repeat region circular profile. 331 364 - -
Bva13g03514 983 ProSiteProfiles TPR repeat region circular profile. 229 261 - -
Bva13g03514 983 SUPERFAMILY TPR-like 347 847 IPR011990 GO:0005515
Bva13g03514 983 Gene3D Tetratricopeptide repeat domain 336 395 IPR011990 GO:0005515
Bva13g03514 983 SUPERFAMILY TPR-like 66 393 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03514 Bva-Chr13 23849379 23859057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03514 240 983 Glycosyltransferase AT3G04240 86.022 0.0 1376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03514 K09667 - gmx:100806661 1893.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03514 13 23849379 23859057 Bva13g03514 13 23849379 23859057 ECH