Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03509 ATGGCTAGctctttgatattttgtttgtgtAGCTTGGTTCTGGCTTTTGTTTCTGCTCAACCTAAACgggctttcttcattttcggCGATTCCCTGGTTGACAGCGGCAACAATGATTTCTTAGCGACCACTGCACGCGCAGATGCTCCTCCCTATGGCATTGACTATCCAACACACAGACCCACTGGACGTTTCTCCAACGGCCTAAACATCCCAGATCTAATCAGCGAGCAACTCGGCTTAGAGCCTACCCTGCCGTATTTGAGTCCTCTACTAGTCGGAAAGAAGCTTCTAAATGGTGCGAATTTTGCTTCTGCCGGCATTGGCATCCTCAATGATACTGGATTTCAATTTCTGCACATAATCCACATCTACAAGCAGTTGAAGCTTTTCGAACATTACCAGGAAAGATTGAGTGGACACGTTGGTGCACAACGTGCTGGGGAAGTAGTAAACAGAGCACTCGTCCTCATCACTCTCGGAGGTAACGATTTTGTCAACAATTACTACTTGGTACCCTACTCCGCAAGATCTCGCCAATTTTCTCTCCCAGACTACGTCCGATATATCATATCTGAGTACCGCAAAGTTCTCAGGAGGATGTACGATTTGGGAGTTCGTAGGGTTCTTGTTACCGGAACGGGGCCGATGGGGTGTGCTCCGGCAGAATTAGCCACGAGGAGCAGAAATGGTGATTGCGTCGTTGAACTGCAGAGGGCTGCCAACTTGTACAATGCCCAACTCGTTGACATGATCAAGAGTCTTAACCGGGAGATTGGTCGGGATGTTTTCGTTGCTGCTAATGCCTACCAAATGCACATGGATTTCATCAGCAACCCTCGAGCATATGGGTTTGTTACATCAAAGGTGGCATGCTGCGGACAGGGTCCGTACAATGGCGTTGGACTGTGTACacaactttcaaatttatgcCCAGATCGAGACCTATACGCCTTTTGGGATTCATTCCATCCCTCCGAGAAAGCTAGCAGGATCATAGTCCAGCAGATTCTCAGAGGCTCCATGGAGTACATGCACCCTATGAATCTCAGCACCATCATGGCTTTGGACACCCGGACTTG 1082 0.464 MASSLIFCLCSLVLAFVSAQPKRAFFIFGDSLVDSGNNDFLATTARADAPPYGIDYPTHRPTGRFSNGLNIPDLISEQLGLEPTLPYLSPLLVGKKLLNGANFASAGIGILNDTGFQFLHIIHIYKQLKLFEHYQERLSGHVGAQRAGEVVNRALVLITLGGNDFVNNYYLVPYSARSRQFSLPDYVRYIISEYRKVLRRMYDLGVRRVLVTGTGPMGCAPAELATRSRNGDCVVELQRAANLYNAQLVDMIKSLNREIGRDVFVAANAYQMHMDFISNPRAYGFVTSKVACCGQGPYNGVGLCTQLSNLCPDRDLYAFWDSFHPSEKASRIIVQQILRGSMEYMHPMNLSTIMALDTRT 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03509 360 CDD SGNH_plant_lipase_like 24 341 IPR035669 -
Bva13g03509 360 SUPERFAMILY SGNH hydrolase 25 339 - -
Bva13g03509 360 Pfam GDSL-like Lipase/Acylhydrolase 26 337 IPR001087 GO:0016788
Bva13g03509 360 Gene3D SGNH hydrolase 15 342 IPR036514 -
Bva13g03509 360 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 6 357 - -
Bva13g03509 360 PANTHER GDSL ESTERASE/LIPASE LTL1 6 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03509 Bva-Chr13 23829053 23830898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03509 24 354 Acyl Lipid Metabolism Gene Families AT4G10950 32.733 5.20e-61 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03509 - - gmx:100819826 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03509 13 23829053 23830898 Bva13g03509 13 23829053 23830898 ECH