Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03468 ATGGATgttccctttccttttcattctTCTGTACTCATTCTCTGTTTTGTGCTCTTGCTACCATCTGCAAAACCAGTTTCTGATGGTAGCACATTACTATACAAGAGCTGTGCAAGCCAAAAATTGGCTCAAACTCAGACTCAAAcgctttcctctcttttccAACAACTCATTGCTCAATCCTCCGAatccaaatttttcaaaaccaCGGAAATGGGGAGCGATGATACTGCCATCTCAGGACTCTTCCAGTGCAGGGAGGATATCAGCAGAGAAGAGTGTTTCAACTGCGTCAACTTGCTAACGGAGATGTCGAGCACCTTGTGCAGCCAGTCAGCGGCAGCTCGAGTGCAGCTGGAGAGGTGCTACACCCAATACGAGATCGATGGATTTTCAGATGACGACATTGGTGATTATAAAAGGAGTCTGCTAAACAGCGAATGTGGGGAACCCACACTGGATTATGTAAATGCCAAATTTAGAGAGTTAATGGACGCGGCCTTCGTCTCCGTGCAAACTGAGATTCTAGACAGTAAGGTAGACTTCTATGCAAGGAATTACGAATCAGTGATGTTGATGGCACAGTGTGAAGCTGATTTAGACGCTTGCGTGTGTAGTGAATGCGTGAGCGATGCAATCCAAGTAGCTAGGGAAGAATGTGGTACCTCGCTTTCAGCACATATTTATCTTGACAAATGCTTCATGACCTACATGTACCACCCGGATGCCACTCCCGGCAATTCATTCCCAGGGGTAAACAGAAACAATAGCAATAACAAAAGAACGGCAGCAATAATTGTTGGAGGGGCTGCAGCTCTCTGTTTcggttttattttcttgttattccTCATATCTCGAAGTAGGAACAAAGAATACCACTA 881 0.4143 MDVPFPFHSSVLILCFVLLLPSAKPVSDGSTLLYKSCASQKLAQTQTQTLSSLFQQLIAQSSESKFFKTTEMGSDDTAISGLFQCREDISREECFNCVNLLTEMSSTLCSQSAAARVQLERCYTQYEIDGFSDDDIGDYKRSLLNSECGEPTLDYVNAKFRELMDAAFVSVQTEILDSKVDFYARNYESVMLMAQCEADLDACVCSECVSDAIQVAREECGTSLSAHIYLDKCFMTYMYHPDATPGNSFPGVNRNNSNNKRTAAIIVGGAAALCFGFIFLLFLISRSRNKEYH 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03468 293 PANTHER PLASMODESMATA-LOCATED PROTEIN 4 11 290 - -
Bva13g03468 293 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 11 290 - -
Bva13g03468 293 ProSiteProfiles Gnk2-homologous domain profile. 141 242 IPR002902 -
Bva13g03468 293 Gene3D - 29 131 IPR038408 -
Bva13g03468 293 Gene3D - 144 241 IPR038408 -
Bva13g03468 293 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Bva13g03468 293 Pfam Salt stress response/antifungal 157 237 IPR002902 -
Bva13g03468 293 Pfam Salt stress response/antifungal 45 127 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03468 Bva-Chr13 23653400 23654386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03468 5 214 Receptor kinase-like Gene Family AT3G45860 26.457 8.67e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03468 - - gmx:100795973 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03468 13 23653400 23654386 Bva13g03468 13 23653400 23654386 ECH