Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03134 ATGAAGGCCGAGAATGGCCTGGACGGGGATACGAAGAAACATGACGTGGGAAGCACATCAGAGAATCATGCAGAAACCAGCAAAAATgacaaacaaaaggaaaaaactgaGACAGTTCCATTTTACAAGCTCTTCACATTTGCCGACTCCACCGATTTTCTTCTCATGTTTGTGGGGACAATTGGAGCCCTCGGAAATGGCTTGGGCTTGCCTCTCATGACATTACTTTTCGGTCAAATGATTAATTCTTTTGGCAACAACCAAAACACTAACCAAGTCGTTCATGAAGTCTCCAAGgTTTCTCTGAAATTCGTATACTTGGCGGTTGGAACTGGGGTGGCAGCATTTCTCCAGGTGACTGGGTGGATGGTCACAGGGGAGAGACAGGCTGCAAGAATAAGGAGCCTGTATTTGAAAACTATACTGAGACAAGATGTTGCTTTCTTTGATAAGGAAACAAATACTGGTGAAGTGGTAGGGAGAATGTCTGGTGACACTGTTCTCATACAAGATGCCATGGGTGAGAAGGTTGGGAAATTTCTACAATTAACATCGACATTCGTCGGAGGATTTATTGTAGCATTTATCAAAGGGTGGCTTCTGACCCTTGTCTTGTTGTCCAGTGTTCCACTTCTTGCAATATCTGGTGCATCTATGGCTATAATCGTAGGCAGGATGGCAACTCGCGGTCAAACCGCTTATGCAAAAGCAGCAAATATAGTTGAACAGACTATTGGTTCAATTAGAACGGTTGCATCCTTCACCGGAGAAAAACAAGCAGTATCTGGTTACAAGAAATATCTGGTAGATGCTTACAAATCAGGAGTTCGTGAAGGTTTTGCAGTCGGAATGGGTCTTGGCatggttttctttgttttctttgctgGTTATTCTTTGGCTGTGTGGTATGGCGCAAAGTTGATACTGGAGAAAGGATATACTGGGGGTTCAGTGATTAATGTGATCGTTGCTGTGTTAACTGCTTCCATGTCCCTTGGCCAGGCATCACCTTGCATCACTGCTTTTGCTTCTGGTCAAGCTGCGGCATATAAAATGTTCGAGACAATAGAGAGGAAACCAGAGATAGATTCTTATGATCCAAAGGGAAAAGTATTAGAGGATATTCAAGGTGACATAGAGTTAAGGGATGTGTATTTCAGTTATCCAGCTAGACCTGAGGAGCTGATATTCAATGGGTTCTCTCTTCATATACCTAGTGGCACAACTGCAGCTTTAGTTGGACAGAGTGGGAGTGGAAAGTCTACAGTTATCAGTCTAATTGAAAGATTCTATGATCCACAGGCAGGTGAAGTTCTTGTAGATGGGATTAACCTCAAACAGTTTCAGGTCAGATGGATCAGAGAAAAAATTAGCCTTGTCAGCCAAGAGCCAGTGCTGTTTGCAGTTAGCATTAAGGATAACATAGCATATGGAAAGGAGGGAGCAACAATAGAAGAGATAAGAGCTGCAGCTGAACTTGCAAATGCAGCCAAATTCATTGATAAATTGCCTCAGGGATTAGACACGATGGCCGGTGAGCATGGAACTCAGCTGTCTGGTGGACAAAAGCAACGTATTGCCATTGCAAGAGCAATTCTGAAAGACCCAAGAATTCTACTTCTAGATGAAGCTACAAGTGCACTTGATGCAGAGTCTGAAAGGATAGTGCAAGAAGCTCTAGACAGGATTATGGTTAATCGAACTACTGTTATTGTAGCACATCGCTTGAGCACAGTGAAGAATGCTGATATGATTGCAGTTATTCATAGAGGGAAGATGGTTGAAAAagGAACACACTCAGAATTGCTCAAGGATCCTGAAGGAGCTTACTCGCAGCTTATACGTTTACAAGAAGGATTTAGTGCAGATGCCAAGATGATGTACGAGGAAGCAAGCCAAGTTGCCAATGATGCTGTTGGAAGTATAAGAACTGTAGCTTCTTTCTGTGCTGAAGAGAAGGTAATGGAATTGTACAGGAAGAAATGTGAAGGCCCTATGAAGACAGGGATACGACAAGGCTTGATAAGTGGAACAGGATTTGGAGTGTCGTTTTTCTTACTGTTTGCTGTGTATGCACTTAGTTTCTATGCTGGAGCCAGGTTTGTGGAAGATGGAAAAGCAACATTCAAAGATGTTTTCCGGgttttctttgctttgacAATGGCAGCTATGGGAATTTCCCAATCAAGCTCACTTGCTCCTGATTCTAGCAAAGCCAAGATAGCTGCTGCTTccatatttcaaataatagaCAGACAGTCCCTAATAGATCCAAGTGATGAGTCTGGTACTACACTAGATAATGTAAAGGGAGAAATTGAGCTTCGTCATATAAGCTTTAAGTATCCATCTAGGCCAGATATACAGATTTTCCGAGACCTCAGCTTGACCATCCATTCTGGCAAGACAGTGGCCCTTGTTGGTGAAAGTGGAAGTGGGAAATCCACAGTGATTGCATTGTTACAAAGATTTTATGATCCTGATTCAGGTCACATTAAAATCGATGGAATAGAAATTCAGAAGTTGCAGCTAAAGTGGTTAAGGCGACAAATGGGTCTTGTAAGCCAAGAACCAGTGTTGTTCAATGACACCATCCGTGCCAATATTGCATATGGCAAGGAAGGAGCTGCAACAGAAGCAGAAATCATAGCTGCAGCAGAATTGGCTAATGCACATGGCTTCATCAGTAGCTTACACCAGGGCTATGACACAGTAGTGGGAGAGAGGGGAATCCAATTATCTGGTGGGCAGAAACAAAGGGTTGCCATAGCACGTGCGATAATGAAAAGTCCAAAGATATTGCTCCTTGATGAAGCCACAAGTGCGTTAGACGCTGAGTCAGAGAGAGTAGTTCAAGATGCACTAGACAGGGTTATGGTGAACAGGACCACTGTGGTGGTGGCACATCGTCTATCCACTATAAAGAATGCAGATGTAATTGCAGTGGTCAAAAATGGAGTTATAGTAGAGAAAGGAAGGCATGAAACCTTAATCAACATTAACGATGGATTTTATGCTTCTTTGGTCCAACTTCACACTAGTGCTTCAACagtata 3056 0.4185 MKAENGLDGDTKKHDVGSTSENHAETSKNDKQKEKTETVPFYKLFTFADSTDFLLMFVGTIGALGNGLGLPLMTLLFGQMINSFGNNQNTNQVVHEVSKVSLKFVYLAVGTGVAAFLQVTGWMVTGERQAARIRSLYLKTILRQDVAFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLTSTFVGGFIVAFIKGWLLTLVLLSSVPLLAISGASMAIIVGRMATRGQTAYAKAANIVEQTIGSIRTVASFTGEKQAVSGYKKYLVDAYKSGVREGFAVGMGLGMVFFVFFAGYSLAVWYGAKLILEKGYTGGSVINVIVAVLTASMSLGQASPCITAFASGQAAAYKMFETIERKPEIDSYDPKGKVLEDIQGDIELRDVYFSYPARPEELIFNGFSLHIPSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLVDGINLKQFQVRWIREKISLVSQEPVLFAVSIKDNIAYGKEGATIEEIRAAAELANAAKFIDKLPQGLDTMAGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVIVAHRLSTVKNADMIAVIHRGKMVEKGTHSELLKDPEGAYSQLIRLQEGFSADAKMMYEEASQVANDAVGSIRTVASFCAEEKVMELYRKKCEGPMKTGIRQGLISGTGFGVSFFLLFAVYALSFYAGARFVEDGKATFKDVFRVFFALTMAAMGISQSSSLAPDSSKAKIAAASIFQIIDRQSLIDPSDESGTTLDNVKGEIELRHISFKYPSRPDIQIFRDLSLTIHSGKTVALVGESGSGKSTVIALLQRFYDPDSGHIKIDGIEIQKLQLKWLRRQMGLVSQEPVLFNDTIRANIAYGKEGAATEAEIIAAAELANAHGFISSLHQGYDTVVGERGIQLSGGQKQRVAIARAIMKSPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGRHETLININDGFYASLVQLHTSASTV 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03134 1018 ProSitePatterns ABC transporters family signature. 913 927 IPR017871 GO:0005524
Bva13g03134 1018 Pfam ABC transporter transmembrane region 56 330 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva13g03134 1018 Pfam ABC transporter transmembrane region 617 724 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva13g03134 1018 Pfam ABC transporter 398 546 IPR003439 GO:0005524
Bva13g03134 1018 SMART AAA_5 406 598 IPR003593 -
Bva13g03134 1018 SMART AAA_5 800 993 IPR003593 -
Bva13g03134 1018 Gene3D - 763 1013 IPR027417 -
Bva13g03134 1018 Gene3D - 369 618 IPR027417 -
Bva13g03134 1018 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 379 615 IPR003439 GO:0005524
Bva13g03134 1018 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 57 344 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva13g03134 1018 MobiDBLite consensus disorder prediction 1 33 - -
Bva13g03134 1018 ProSitePatterns ABC transporters family signature. 518 532 IPR017871 GO:0005524
Bva13g03134 1018 Gene3D ABC transporter type 1, transmembrane domain 43 620 IPR036640 GO:0005524|GO:0016021
Bva13g03134 1018 SUPERFAMILY ABC transporter transmembrane region 43 363 IPR036640 GO:0005524|GO:0016021
Bva13g03134 1018 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 763 1011 IPR027417 -
Bva13g03134 1018 Pfam ABC transporter 792 941 IPR003439 GO:0005524
Bva13g03134 1018 CDD ABC_MTABC3_MDL1_MDL2 379 617 - -
Bva13g03134 1018 CDD ABC_MTABC3_MDL1_MDL2 773 1011 - -
Bva13g03134 1018 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 619 1014 - -
Bva13g03134 1018 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 16 618 - -
Bva13g03134 1018 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 613 738 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva13g03134 1018 Gene3D ABC transporter type 1, transmembrane domain 623 1015 IPR036640 GO:0005524|GO:0016021
Bva13g03134 1018 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 773 1010 IPR003439 GO:0005524
Bva13g03134 1018 PANTHER - 619 1014 - -
Bva13g03134 1018 PANTHER - 16 618 - -
Bva13g03134 1018 CDD ABC_6TM_Pgp_ABCB1_D1_like 56 352 - -
Bva13g03134 1018 CDD ABC_6TM_Pgp_ABCB1_D2_like 614 756 - -
Bva13g03134 1018 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 369 617 IPR027417 -
Bva13g03134 1018 SUPERFAMILY ABC transporter transmembrane region 615 752 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03134 Bva-Chr13 22003026 22008798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03134 30 619 Calmodulin-binding Proteins AT2G36910 48.311 0.0 568
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03152 04 25814381 25820556 Bva13g03134 13 22003026 22008798 BWGD