Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02886 ATGGCGAGGAAAAGGGGGCTTCTGGGTTGTGGCATTGGTTCGTACATTgtgatttttatgtttatcatACAGATGCAATGTCAGTTACATGTGCTCGGGATGTTGGACCCTGTTGATTTCTTGGCTCTGCAATCGATTCGCAAGGCTCTGGATGAGATGCCTGGAtcgaatttcttttcttcctggGATTTTACTTCCGACCCTTGTAATTTCGCCGGCGTTTACTGTGATTCTAACAAAGTCATTGCTCTCAATCTCGGAGATCCAAGAGCCGGTTCTCCTGGTTTAACCGGAAAGCTCGACCAGGCAATCGGTAAGCTTTCTGCTTTGGCTGAATTCACGGTTGTCCCCGGTAGGATATACGGCCCTCTGCCGCAAACATTGTCTCAGCTGAAGAATCTCAGGTTCCTCGGAGTCAGCAGGAACTTCATCTCCGGCCCGATTCCAGCGAGTTTGGGTCAGTTGCGAAATCTCAGAACCCTTGATCTCAGCTACAATCAGTTGAGTGGAGAGATTCCTCCGTCCGTGGGAGCCTTACCGGAGCTAACCAATGTGATTCTTTGCCACAACCATCTGTCCGGTTCGGTTCCCTCATTTGCATCACAGAGACTAGCCCGGCTTGACCTGAAGCACAACGCTGTCACCGGTTCGCTCGGTCCGAATTCTCTCCCTCCATCTCTGCAATACCTCTCTCTATCCTGGAACCAGCTCAGTGGCCCCTTGGACCGGCTATTGAACAGAATGAACCAGTTGAATTATCTGGACCTTAGTCTGAACAAGTTCACAGGCCCTATTCCGGGTCGGATATTCTCTTTTCCACTCACTAATCTCCAATTAGAAAGAAACCAGTTCACCGGTTTGGTTCAACCAGTTGAGCAAGTGACAATCCAGACCGTCGATCTCAGTTACAACCAGTTGTCGGGTGGAATATCACCCATGTTCTCGACCGTTGAGAATCTGTACCTGAACAATAACCGGTTCACGGGTCAGGTGCCGAGTAGTTTTGTGGACCGATTATTGGCCGCAAACATACAGATACTGTATTTACAGCACAATTATCTTACGGGGATTGAGATTAGTCCAACGGCCGATATTCCTCTAAGCAGTTCTTTGTGCCTGCAGTATAACTGTATGGTCCCACCCATACAGACGCCGTGCCCCTTGAGGGCGGGGAATCAGAAAATTCGGCCTACTTCGCAGTGCAACGAGTGGAGGGGATA 1220 0.4828 MARKRGLLGCGIGSYIVIFMFIIQMQCQLHVLGMLDPVDFLALQSIRKALDEMPGSNFFSSWDFTSDPCNFAGVYCDSNKVIALNLGDPRAGSPGLTGKLDQAIGKLSALAEFTVVPGRIYGPLPQTLSQLKNLRFLGVSRNFISGPIPASLGQLRNLRTLDLSYNQLSGEIPPSVGALPELTNVILCHNHLSGSVPSFASQRLARLDLKHNAVTGSLGPNSLPPSLQYLSLSWNQLSGPLDRLLNRMNQLNYLDLSLNKFTGPIPGRIFSFPLTNLQLERNQFTGLVQPVEQVTIQTVDLSYNQLSGGISPMFSTVENLYLNNNRFTGQVPSSFVDRLLAANIQILYLQHNYLTGIEISPTADIPLSSSLCLQYNCMVPPIQTPCPLRAGNQKIRPTSQCNEWRG 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02886 406 Pfam Leucine rich repeat N-terminal domain 39 77 IPR013210 -
Bva13g02886 406 SUPERFAMILY L domain-like 40 383 - -
Bva13g02886 406 Pfam Leucine Rich repeat 225 239 IPR001611 GO:0005515
Bva13g02886 406 ProSiteProfiles Leucine-rich repeat profile. 157 179 IPR001611 GO:0005515
Bva13g02886 406 Pfam Leucine Rich Repeat 157 178 IPR001611 GO:0005515
Bva13g02886 406 Gene3D Ribonuclease Inhibitor 39 202 IPR032675 -
Bva13g02886 406 Gene3D Ribonuclease Inhibitor 274 379 IPR032675 -
Bva13g02886 406 PANTHER LRR RECEPTOR-LIKE KINASE 20 402 - -
Bva13g02886 406 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 20 402 - -
Bva13g02886 406 Gene3D Ribonuclease Inhibitor 203 272 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02886 Bva-Chr13 20889497 20891324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02886 42 356 Receptor kinase-like Gene Family AT5G62230 31.325 6.59e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02886 - - zju:107426049 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02942 04 24855364 24857194 Bva13g02886 13 20889497 20891324 BWGD
Bva13g02886 13 20889497 20891324 Bva13g02886 13 20889497 20891324 ECH