Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02880 ATGCTCTCTCCGAGCCAAGACTCTGTTTTGCCCCATACCCACTTTTCCGTTATGCTCAGACTCCTCAACGAGAACCTCCGGCGCCTTTGCTCCCGTCTCCGGTGGCCAATTCGCCGTTCCCGGTCCAAAGTTGTTGTCAAAAGGTTCGGCAAGTCGAACTCACAAACTCAGACTGATGCTAAACATGAACTTAGCATTAATGGGTCGACGGTGGTTCATCCTAATAGTCAATTGGGTAGTCCAAAATCCGATAATCCTATACGGATTGCGACCTTTAACGCTGCCATGTTCTTCATGGCACCTGCAGTTCCCAAGGCAGAAAAAGTTGCCACATTTGACGATGAAAATGATGGTGTTCTGAAACTTGGACGATCTTTTGACGTGAACTTAAGAGCAAAGTCTGCTGATGATCGCCCAAAAGGTATATTAAAGCAACCATCCCTGCATCCCAATTCCATGAATAGCTCGGAAAATCTCACCAAGCAACAGAGGTTCGCAAAATCCAAGTTAAGAGTTTCCATAAATTTACCAGACAACGAGATTTCCTTACTGCGCAATCGGCAATTGAGTTTCTCGGAATATGAAAAAGAGGGTTCTTCAGGTTTgagtaaaatttcaaatgggAGAGCTCACATGAGAGCCTCTGTGAGTTTTTCTGGATATGTGGGAAATGGGATAAACACTGAGAGCCATAGAAGCCGTAGAACTGTGCTTGATGTTCTGAGAGAATTGGATGCTGATATTTTGGCTCTGCAAGATGTGAAAGCAGAGGAAGAGAATGCGATGAAGCCTTTGTCTGATTTGGCCTCTGCTTTGGGAATGAATTATGTGTTTGCTGAAAGCTGGGCACCGGAGTACGGCAACGCTGTTTTGTCAAAGTGGCCGATTAAACGGTGGAAAGTTCAGAAAATCTTTGACGACACCGATTTCAGGAATGTTCTGAAGGCCACTATTGAAGTACCAGAAACAGGAGAAGTCAACTTCTACTGTACCCACCTTGATCATCTTGATGAGAATTGGCGGATGAAGCAGATAAACGCAATAATCCAATCTAATGATGAGCCTCACATCATAGCTGGAGGTCTTAATTCACTCGACGAAACAGATTACTCCCAAGAAAGATGGACAGACATTGTAAAGTACTATGAAGAAATGGGCAAGCCAACACCAAAGGTTGAAGTCATGAGATACCTAAAGAGTAAACAGTACACAGATGCTAAGGACTTTGCCGGGGAATGTGAATCAGTGGTCATGATTGCCAAAGGCCAAAGTGTTCAAGGGACTTGCAAGTATGGAACTCGGGTAGATTACATATTGTCATCCTCAGATTCTCCATATAAGTTTGTTCCTGGTTCATATTTAGTCCTTTCTTCCAAAGGAACATCAGATCATCACATAGTGAAAGCTGATATAGTGAAAGTAAATACAGATTCTCAGGAAAATGTCATGAAGAAGCAACGGCAACCAAGACAGAAAATTGTAAGAATAACAGATTCAAGTCCTTCAAAAGCTATATGGAAAATGCAGACACAGGAGAGATATTG 1544 0.4255 MLSPSQDSVLPHTHFSVMLRLLNENLRRLCSRLRWPIRRSRSKVVVKRFGKSNSQTQTDAKHELSINGSTVVHPNSQLGSPKSDNPIRIATFNAAMFFMAPAVPKAEKVATFDDENDGVLKLGRSFDVNLRAKSADDRPKGILKQPSLHPNSMNSSENLTKQQRFAKSKLRVSINLPDNEISLLRNRQLSFSEYEKEGSSGLSKISNGRAHMRASVSFSGYVGNGINTESHRSRRTVLDVLRELDADILALQDVKAEEENAMKPLSDLASALGMNYVFAESWAPEYGNAVLSKWPIKRWKVQKIFDDTDFRNVLKATIEVPETGEVNFYCTHLDHLDENWRMKQINAIIQSNDEPHIIAGGLNSLDETDYSQERWTDIVKYYEEMGKPTPKVEVMRYLKSKQYTDAKDFAGECESVVMIAKGQSVQGTCKYGTRVDYILSSSDSPYKFVPGSYLVLSSKGTSDHHIVKADIVKVNTDSQENVMKKQRQPRQKIVRITDSSPSKAIWKMQTQERY 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02880 514 SUPERFAMILY DNase I-like 232 471 IPR036691 -
Bva13g02880 514 Coils Coil 241 261 - -
Bva13g02880 514 MobiDBLite consensus disorder prediction 138 158 - -
Bva13g02880 514 Gene3D Endonuclease/exonuclease/phosphatase 220 473 IPR036691 -
Bva13g02880 514 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 18 509 - -
Bva13g02880 514 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 18 509 - -
Bva13g02880 514 Pfam Endonuclease/Exonuclease/phosphatase family 229 464 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02880 Bva-Chr13 20858091 20859026 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02880 - - zju:107425980 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02937 04 24827766 24831037 Bva13g02880 13 20858091 20859026 BWGD
Bva13g02880 13 20858091 20859026 Bva13g02880 13 20858091 20859026 ECH