Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02873 ATGCCGATGGCGGCTGGGCCAGCTTCGCCGACCGATCGTGCTCCCCCGGTGGGGCCAACGATGGTGCCGATGCGATCAGCACCAATGATGGTGTCGGACAACTTTGCCAAGGATGCTGTTCTTGCCTGGTTTCGTGGCGAGTTTGCAGCGGCTAACGCCATCATTGATGCCCTCTGTGGCCACCTGTTTCAGCTCAGTTCCGCCGCAGGAGCCTCCGAATATGAGTCGGTGTTCGCCGCTATCCACCGTCGGAGACTGAATTGGATCCCGGTGCTCCAGATGCAGAAGTATCACACTATTGCTGACGTGGCCGAGGAACTACGCAAAGTGGCAGAGAAGAAAACGGAGGCTAAGGAAAATAAGGAAGCTGAGAAGAAGACTGAGGATGTGAAGTGTTGTACGGAAGAGAACTTGACGCAGAGTAACGGAAATGGCGAAGAAGAAACAGTAGAAGAGTATGATTCCCCAGACAGTGAAATTACTGATTCAGGATCCCAAGAAATGCAGCCCAGTTGGATGAACAATAATATATGCTCCAACCATGAAGAATGTGAAGGACGTTCTTCACAGATCAAGTTAACGAAAGGTTTCACGGCAAAGGAATCAGTGAAAGGGCATATGGTGAATGTTGTGAAAGGACTGAAGTTATATGAGGACATATTCACTGATTCAGAACTCCACAAGCTTATTGATTTTGTGAATGAGATCCACGCAGCTGGCCAGAATGGCGAGCTCTCAGGCGAAACTTTTATACTGTTCAACAAGCAGATAAAGGGGAACAAGAGAGAGCTGATTCAACTGGGTGTTCCAATTTTTGGACCCATAAAGGAGGATGCCAAAAGCAATATAGAGCCAATTCCAGCTCTTCTCCAAGGTGTCATTGACCACCTTATTCAGTGGCATCTAATTCCAGAGTACAAAAGACCAAACGGTTgtataattaactattttgaAGAGGGGGAACATTCTCAGCCATTCCTGAAACCACCACATCTGGACCAGCCTCTGTCTACTCTTGTTCTATCTGAATCAACTATGGCTCTTGGGCGTACCCTTGTCAGCGATAATGATGGAAATTACAAGGGGCCACTCATGCTCTCATTGAAGCAGGGCTCTTTTATAGTGATGAGAGGAAACAGTGCTGACATGGCTAGGCACGTAATGTGCCCATCCCCTAACAGAAGGGTCAGCATCACCTTCTTTAGAGTGAAGCCAGACTCCAATCACTGTCAGTCTCCAACTGCGGCCATGACAGGTGCAATGACTGTTTGGCAACCTGGTAGTATTGCTACCTCGTATGCTGCTTTGCCAAATGGAGCTCTTAGTGGCTATGATGCTGCTATGGATATGATGCCCAAATGGGGAATTCTTGGTTCTCCAACGGTCATGCTGACTCCTGTGCGTCCTATGGTATTGAACCCTCGCAAGCTTCCTCGTGGTGGGACAGGGGTGTTCTTGCCCTGGAATGCGCCACCCAGAAAACCTGCAAAGCATCTTCCTCCTCGTGCCCAAAAGGGAAGGCTTCTGGCATTACCTTCCCCAGTAGAATCACACATGGCAGAATCCACTTCTGAATCCGCTATAACTATTGAAGGTTA 1598 0.4825 MPMAAGPASPTDRAPPVGPTMVPMRSAPMMVSDNFAKDAVLAWFRGEFAAANAIIDALCGHLFQLSSAAGASEYESVFAAIHRRRLNWIPVLQMQKYHTIADVAEELRKVAEKKTEAKENKEAEKKTEDVKCCTEENLTQSNGNGEEETVEEYDSPDSEITDSGSQEMQPSWMNNNICSNHEECEGRSSQIKLTKGFTAKESVKGHMVNVVKGLKLYEDIFTDSELHKLIDFVNEIHAAGQNGELSGETFILFNKQIKGNKRELIQLGVPIFGPIKEDAKSNIEPIPALLQGVIDHLIQWHLIPEYKRPNGCIINYFEEGEHSQPFLKPPHLDQPLSTLVLSESTMALGRTLVSDNDGNYKGPLMLSLKQGSFIVMRGNSADMARHVMCPSPNRRVSITFFRVKPDSNHCQSPTAAMTGAMTVWQPGSIATSYAALPNGALSGYDAAMDMMPKWGILGSPTVMLTPVRPMVLNPRKLPRGGTGVFLPWNAPPRKPAKHLPPRAQKGRLLALPSPVESHMAESTSESAITIEG 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02873 532 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 308 404 IPR005123 -
Bva13g02873 532 PANTHER 2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE 22 530 - -
Bva13g02873 532 Gene3D - 197 412 IPR037151 -
Bva13g02873 532 SUPERFAMILY Clavaminate synthase-like 204 403 - -
Bva13g02873 532 MobiDBLite consensus disorder prediction 1 21 - -
Bva13g02873 532 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 22 530 IPR044842 GO:0003729|GO:0006402|GO:0032451
Bva13g02873 532 MobiDBLite consensus disorder prediction 159 176 - -
Bva13g02873 532 Coils Coil 100 127 - -
Bva13g02873 532 MobiDBLite consensus disorder prediction 136 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02873 Bva-Chr13 20815292 20820069 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02873 K10767 - gmx:100791586 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02931 04 24804427 24809290 Bva13g02873 13 20815292 20820069 BWGD
Bva13g02873 13 20815292 20820069 Bva13g02873 13 20815292 20820069 ECH