Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02846 ATGGAGTCAACTACGTCTGACCATGTTATTTCCATTGCAAATACAAATACTGATCTCCGGGAGGAGAAGACATGGTTCCGATTTTCTCTTCCGCACATTCTTAGATCAAAGAAAATCCATTGCTCTCTTGTCCCCCTTGCCTCTTATCTCAGGGACAAGAAGCAAAGCGATCAAGATATCAAGAAGATCGTCCACAGTATCAAAGTTGGAGTGTCCCTTGTTTTGGTTTCACTTCTCTATCTCTTGGATCCTCTCTACGAACAAGTTGGAGAAAATGCAATGTGGGCTATAATGACTGTTGTCGTCGTCTTTGAGTTCACCGCagGTGCCACACTTGGCAAGGGCTTGAATCGCGGAATTGGGACTATATCCGGAGTTGGACTTGGTTGCTTAGCTGCACTCTTCGCCCAATACGTTGGAGGAGTTGGCCACCCTATTATTATTgccatttttgtatttatctttGGCGCAGCTGCAACGTACTTACGGTTGGttccaaacataaaaaaaagatatgattATGGAGTGCTCATCTTCGTGCTCACCTTCAATCTGGTCGTGGTGTCCGGATTACGCGCCGAACAAGTCCTGCAATTAGCGCGTCAACGTCTATTAACCATTCTTTTGGGTTTCATTGTATGCATTTCTGTCAGTGTCTTCGTCTTCCCCTTGTGGGCCAGCGATGAACTTCATCGCTCCATTGTCTCCAGATTCCAACACCTTTCCTCTGCCATTCAAGGATGCTTGGAGGACTCTGCTCAACTCGTTGACGAAAAGGAAAGGGAGCCGAAAGCTAGATTGGGTGCTTGCAAATCAATGCTAGACACCAGGTTAAAGGATGAAACCCTGGTTAATTTTGCAAAATGGGAACCATGGCACGGGAGATTCGGATTTTCCCATCCATGGGAAGAGTACCTGAAGATTGGTGACGTTCTCAGAGAGCTGGCTGCCATTGTCGTTTCTCTGGGTAGTTGCCTCCAATCCTCAACACAGCCCTTGACGCAATCGGTGAAAGAACCATGTGAAGCGATTTGGTCGAGTCTGCGAGAGCTCGGAGATAGCATCAAGGAAATGAGGAAATGTGGGGCAGAGGCGAAGATAATGCCAAAGTTGAAGGCCGTGAGAGTAGAGCTAAACTTGGTAATGGGTCAATTGGAGATGGCAGCAGTAGAAAACAGCGATGCAGCAGCAATTGCAAGCCTCGTGTTTTTGCTGACGGAGGTGGTGAACAAGGTAGAGGAGCTGGCTAAAGAAGTGGACCAACTCGGAGATCTTGCTGCTTTTCGTACCAACTA 1295 0.4595 MESTTSDHVISIANTNTDLREEKTWFRFSLPHILRSKKIHCSLVPLASYLRDKKQSDQDIKKIVHSIKVGVSLVLVSLLYLLDPLYEQVGENAMWAIMTVVVVFEFTAGATLGKGLNRGIGTISGVGLGCLAALFAQYVGGVGHPIIIAIFVFIFGAAATYLRLVPNIKKRYDYGVLIFVLTFNLVVVSGLRAEQVLQLARQRLLTILLGFIVCISVSVFVFPLWASDELHRSIVSRFQHLSSAIQGCLEDSAQLVDEKEREPKARLGACKSMLDTRLKDETLVNFAKWEPWHGRFGFSHPWEEYLKIGDVLRELAAIVVSLGSCLQSSTQPLTQSVKEPCEAIWSSLRELGDSIKEMRKCGAEAKIMPKLKAVRVELNLVMGQLEMAAVENSDAAAIASLVFLLTEVVNKVEELAKEVDQLGDLAAFRTN 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02846 431 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-LIKE 33 430 - -
Bva13g02846 431 Coils Coil 405 425 - -
Bva13g02846 431 Pfam Aluminium activated malate transporter 57 420 IPR020966 GO:0015743
Bva13g02846 431 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 33 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02846 Bva-Chr13 20662810 20664923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02846 53 426 Miscellaneous Gene Families AT1G08440 39.119 2.52e-90 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02846 - - gmx:100527892 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02904 04 24678971 24681046 Bva13g02846 13 20662810 20664923 BWGD
Bva13g02846 13 20662810 20664923 Bva13g02846 13 20662810 20664923 ECH