Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02768 ATGGCGGGAAAAGGAGGGAAGGGGCTTTTGGCTGCAAAAACCACAACCGCTAACAAGGACAAAGATAAGGATAAGGATAAGAAGAGGCCAGTTTCTCGGTCATCCCGCGCCGGAATTCAGTTTCCGGTGGGTCGTATTCATAGGCAGCTGAAGCAAAGAATCTCAGCTAATGGCCGAGTTGGGGCCACTGCTGCTGTTTACTTGGCTTCCATTCTTGAATATCTGACTGCTGAAGTTCTTGAGTTGGCTGGAAATGCTAGCAAAGATCTCAAAGTGAAGAGAATCACACCCAGGCATTTGCAGCTGGCCATTAGAGGAGACGAGGAGCTGGACACATTGATTAAAGGGACCATTGCTGGTGGTGGTGTCATCCCTCACATTCACAAATCCCTGATCAACAAAACCTCCAAAGAATG 416 0.4832 MAGKGGKGLLAAKTTTANKDKDKDKDKKRPVSRSSRAGIQFPVGRIHRQLKQRISANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTSKE 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02768 138 Pfam Core histone H2A/H2B/H3/H4 12 106 IPR007125 GO:0003677
Bva13g02768 138 PANTHER HISTONE H2A 2 136 - -
Bva13g02768 138 MobiDBLite consensus disorder prediction 16 33 - -
Bva13g02768 138 SUPERFAMILY Histone-fold 15 115 IPR009072 GO:0046982
Bva13g02768 138 Pfam C-terminus of histone H2A 108 137 IPR032454 -
Bva13g02768 138 SMART h2a4 18 138 IPR002119 GO:0000786|GO:0003677|GO:0030527
Bva13g02768 138 CDD H2A 29 134 IPR002119 GO:0000786|GO:0003677|GO:0030527
Bva13g02768 138 Gene3D Histone, subunit A 17 138 IPR009072 GO:0046982
Bva13g02768 138 MobiDBLite consensus disorder prediction 1 38 - -
Bva13g02768 138 PRINTS Histone H2A signature 59 74 IPR002119 GO:0000786|GO:0003677|GO:0030527
Bva13g02768 138 PRINTS Histone H2A signature 74 87 IPR002119 GO:0000786|GO:0003677|GO:0030527
Bva13g02768 138 PRINTS Histone H2A signature 88 102 IPR002119 GO:0000786|GO:0003677|GO:0030527
Bva13g02768 138 PRINTS Histone H2A signature 115 133 IPR002119 GO:0000786|GO:0003677|GO:0030527
Bva13g02768 138 PRINTS Histone H2A signature 29 51 IPR002119 GO:0000786|GO:0003677|GO:0030527
Bva13g02768 138 PANTHER HISTONE H2A 2 136 IPR002119 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02768 Bva-Chr13 20238446 20240309 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02768 K11251 - fve:101311431 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02841 04 24326717 24330106 Bva13g02768 13 20238446 20240309 BWGD