Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02727 ATGTTACTGCCGCTACTAGGAAATTCTCGTGTCCTCGTTTACCCTCTATCaattcttttgcttctttatcTATGGAAAGAAggaaaggaaaaaagttcCAGCTCCCTTTCCAAAGAAATTGGACGATCGAGATACTCGCGAACGGTCATAGAATCGTTTATCCTGTCAGCCATGTATCCTAGAAGGGACAACCGCAACAACAAAGTTGCTCTTTTTGATGGTATTGAGGAGGGTGGCATCAGAGCAACATCTTCTTACTCTTCCCATGAAATCGACGAACATGACAACGAAAGAGCATTAGATGGATTACAAGACAGAGTCATGCTGCTGAAAAGATTGTCAGGCGATATAAATGAGGAGGTGGATAGTCATAACCGAATGCTGGACCATATGGGCAATGATATGGATTCATCAAGGGGAGTCCTCTCAGGAACTATGGACAAATTCAAAATGGTATTTGAGACTAAATCCAGCCGGAGAATGTTTACACTCGTAGCATCCTTTGTCgtgatttttcttataatatacTATCTAACTAGGTA 542 0.3838 MLLPLLGNSRVLVYPLSILLLLYLWKEGKEKSSSSLSKEIGRSRYSRTVIESFILSAMYPRRDNRNNKVALFDGIEEGGIRATSSYSSHEIDEHDNERALDGLQDRVMLLKRLSGDINEEVDSHNRMLDHMGNDMDSSRGVLSGTMDKFKMVFETKSSRRMFTLVASFVVIFLIIYYLTR 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02727 180 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 90 152 IPR000727 -
Bva13g02727 180 Gene3D - 98 161 - -
Bva13g02727 180 SUPERFAMILY SNARE fusion complex 86 152 - -
Bva13g02727 180 CDD SNARE_Bet1 93 150 IPR039899 -
Bva13g02727 180 PANTHER BET1-LIKE SNARE 1-1 59 180 - -
Bva13g02727 180 PANTHER GOLGI SNARE BET1-RELATED 59 180 IPR039897 GO:0015031|GO:0030173
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02727 Bva-Chr13 20020356 20024433 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02727 K08504 - jre:108996060 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02727 13 20020356 20024433 Bva04g02803 04 24146084 24149451 BWGD
Bva13g02727 13 20020356 20024433 Bva13g02727 13 20020356 20024433 ECH