Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02255 ATGGATTCAGCAGCAGTTCCTTCAAGCAGCAGTGTGGTAAAATGCTGCAACTGTGGGTGTAGTTTTTCGTTGGTAGCTGAATCATCAGGCACTTGGCTGCGTTCTGTAAAAAGGAAGCATGATGAATTTGAACAGGACAACCAATTCTCTATACCTGGATTGGATTTGTTTTCAGTTGCACGGGTCCAAATTGAGAATGAATGTGCATTATTGCGCGAGACAGTTAGCACTCATCAACAAGCTATACAAGATTTATATGCTGAATTGGAGGAGGAGAGAAATGCTTCATCAACAGCTGCAAATGAGGCAATGTCAATGATATTGAGGTTGCAGAGAGAGAAGGCAGAGATTCAAATGGAAGCACGGCAGTTCAAGCGATTTACAGAGGAGAAGTTGTCACACGATCAACAGGAGGTTTTAGCATTGGAAGATTTGTTGTATAAGAAAGAACAGACAATCCAGTCACTTACTTGTGAAGTTCAGGCTTATAAGTACAGGATGATGAGTTATGGACTCACTGAGGCTGAGGCAGAAGGCCGTAACCAGAGTATGGGGGAGTTTGACGCTGAATGTGAAATTCCCACCTATGATTACCCTCCTTTAAAATGTAATGTGAATGAGGCTCATGTTGCTGCCTATGCTGAGAATGATGACACGGATATAGAGAAATATGCATTTGGTGAAACCCCCCGTGACCGTTTGAGGAACTTGGAAAATAGGATCTCTCAAATGGAGAGAAGTCCAAGTTACAGTCAGTTGGATGGGGATTTTACAGGAAAAAATATTCTAGAGAAGGTGGTGGTTGGACACTCTCCAAGACGGTCTAGACATTCCAGGAAATATTCCAATGACTCAGGTTCATTTGCTTGGACAGGTAGAGAAGCTGGACCTGAGCTTCTTATGGATTCTCCCAAGCGTAATGGTAGCTTTAAGAAGATGGATTATGTCTCACAATCAGAGGAACATGCCAATTTGAAGAAGGTCGATAATGCATCAGAAGCTGGTGATGATATGAACGACAGAGTTTATACCATTGATTCTGTCCACAGTGGGGCACCACATAACGGTTTTACAGAGTCCAAAGCCGGAGCTGGTGTTTATGACAATTATGGAACCACTCCGAGGTACTCATCGAGTCATGCTGAGTTTGAAGATCCTGACATAAAGAAGCTTTACATGAGACTTCACGCACTCGAGGCTGATAGGGAATCGATGAGGCAGGCAATCATTTCAATGCGCACTGATAAGGCACAGCTTGTGTTACTGAAGGAAATAGCTCAACAGTTGTGTAAAGAGGGTTCACCACAAAAAAGAATGACAATGAAGAAGCCATCTGTTATTGGCAGCTTTtcattcttatcaatttttaagTGGGTGACAGCATTTGTTTTCTGGAGAAAGAGAGCTCGTCGAAGCAAGTATGTATTTGGGCTACCAGCCAACAGTGTGGGCTTGCTAATGCTCTTGGACAAGGGACCCCGCGGAAGGCCATGGAGATGTTTATCAAGCACGCAAGTGTG 1520 0.4316 MDSAAVPSSSSVVKCCNCGCSFSLVAESSGTWLRSVKRKHDEFEQDNQFSIPGLDLFSVARVQIENECALLRETVSTHQQAIQDLYAELEEERNASSTAANEAMSMILRLQREKAEIQMEARQFKRFTEEKLSHDQQEVLALEDLLYKKEQTIQSLTCEVQAYKYRMMSYGLTEAEAEGRNQSMGEFDAECEIPTYDYPPLKCNVNEAHVAAYAENDDTDIEKYAFGETPRDRLRNLENRISQMERSPSYSQLDGDFTGKNILEKVVVGHSPRRSRHSRKYSNDSGSFAWTGREAGPELLMDSPKRNGSFKKMDYVSQSEEHANLKKVDNASEAGDDMNDRVYTIDSVHSGAPHNGFTESKAGAGVYDNYGTTPRYSSSHAEFEDPDIKKLYMRLHALEADRESMRQAIISMRTDKAQLVLLKEIAQQLCKEGSPQKRMTMKKPSVIGSFSFLSIFKWVTAFVFWRKRARRSKYVFGLPANSVGLLMLLDKGPRGRPWRCLSSTQV 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02255 506 Coils Coil 75 130 - -
Bva13g02255 506 PANTHER BNAANNG28530D PROTEIN 8 483 - -
Bva13g02255 506 Coils Coil 388 408 - -
Bva13g02255 506 Pfam Zein-binding 71 160 IPR007656 -
Bva13g02255 506 ProSiteProfiles GTD-binding domain profile. 66 164 IPR007656 -
Bva13g02255 506 PANTHER ZEIN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 8 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02255 Bva-Chr13 17381674 17385167 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02255 - - jre:109013492 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02308 04 21669524 21673713 Bva13g02255 13 17381674 17385167 BWGD
Bva13g02255 13 17381674 17385167 Bva13g02255 13 17381674 17385167 ECH