Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02059 atgggtaactgtaaaagaaattgttgTGCAAGGTGGTGGGGCTCTAAAACGACATCGTCTACGAAGCTCTTGCTGTTTATGGTGCCTCTGATAGTGGTTGCCGGGCTTGTTTCTGTGTTGGGTACTTCAAATACTTCCAACTGGGTTTTCATTGCTAACCGACCATTCCCATGGAGCTCTTCTGTTgatctctcttcttcaatgGAGGTTTCTGATTCATCTGGAAAGCAGAGAGAAGGGGTTGTGGATATAAGATCAAGAGCGGTGGTGGCCGTTGATGCTCACGACAAGGAGGAGAAAGCTATCTCCGATGATACTCTCTTAAATCACTCCTTGTCTCCTATCCAAACAGTTCAACAACTTAACATAAGTGAAGATACCCTCAACGTCTCCAAAATTTGGCCTACCATAGCTCCTATGAATGAACCTTTTCTTCCTCTGACGACACcaaggagagaaagaaagttcAGCATCTTAGACAGAACCGAAGCTGGTCTCCTACAAGCCCGAGCTGCAATTAGAGAAGctaaaaatgagaatgaaacAGCAGATCCAGACTACGTCCCAGTTGGCCCAATGTACTGGAATCCCAAAGCATTTCACAGAAGCTACTTAGAAATGGAGAAGCAGTTCAAGGTGTTCGTCTACGAAGAAGGGGAGCCTCCAGTGTACCATAATGGACCTTGCAAGAGTATATACGCGATGGAGGGGAATTTCATGCATGCCATTGAGATGAATAACCAATTTCGTACTAAAGATCCCGAGAAAGCACATGTCTTCTTCCTTCCATTCAGTGTAGCAATGATGGTTCAATTTGTCTATGTACGTGATTCTCATGATTTTAGCCCCATAAGAAAGACAGTCACAGATTACATTGATCTCATTTCTGGAAGATATCCTTATTGGAATCGAAGCCTTGGTGCTGATCACTTCATGCTTGCTTGCCACGATTGGGGGCCAGAGACTTCATTTTCTGTTCCCAACTTGTACAAAAATTCTATTCGCGTACTTTGCAATGCTAACACCTCAGAGGGATTCAACCCAGCAAAAGATGTATCATTCCCAGAAATCAATCTTCAAACAGGTAGGATACACGGTTTCGTTGGAGGGCCATCTGCGTCAAAACGACcatttttggctttctttgCCGGAGGGGTTCATGGCCCTATTAGGCCAGTGCTTCTTGAGCATTGGGAAAACAAAGATGAAGACATGAAGGTTCACCAGTACCTTCCAAAGGGTGTGTCCTACTACGAGATGCTAAGAAAAAGCAAGTTTTGCCTCTGTCCCAGTGGGTACGAAGTTGCAAGCCCAAGACTGGTGGAGGCTATCTACACAGGATGTGTGCCAGTGCTAATTTCAGAGCATTACGTGCCACCATTCAGCGATGTTCTTAACTGGAAGGCATTTTCAGTTGAGGTCTCTGTGAAGGATATTCCCAACTTGAAGAAAATACTTATGAGTATTTCTCCAAGGCAATTTATAAGAATGCAGAGAAGAGTAGGGCTGATTAGGAGGCACTTTGAAGTACATTCTCCTCCCCAGCGATTCGATGTGTTCCATATGATTCTCCATTCCGTATGGCTTAGAAGATTGAATTTTAGACTTCATGATGATCAATA 1622 0.4174 MGNCKRNCCARWWGSKTTSSTKLLLFMVPLIVVAGLVSVLGTSNTSNWVFIANRPFPWSSSVDLSSSMEVSDSSGKQREGVVDIRSRAVVAVDAHDKEEKAISDDTLLNHSLSPIQTVQQLNISEDTLNVSKIWPTIAPMNEPFLPLTTPRRERKFSILDRTEAGLLQARAAIREAKNENETADPDYVPVGPMYWNPKAFHRSYLEMEKQFKVFVYEEGEPPVYHNGPCKSIYAMEGNFMHAIEMNNQFRTKDPEKAHVFFLPFSVAMMVQFVYVRDSHDFSPIRKTVTDYIDLISGRYPYWNRSLGADHFMLACHDWGPETSFSVPNLYKNSIRVLCNANTSEGFNPAKDVSFPEINLQTGRIHGFVGGPSASKRPFLAFFAGGVHGPIRPVLLEHWENKDEDMKVHQYLPKGVSYYEMLRKSKFCLCPSGYEVASPRLVEAIYTGCVPVLISEHYVPPFSDVLNWKAFSVEVSVKDIPNLKKILMSISPRQFIRMQRRVGLIRRHFEVHSPPQRFDVFHMILHSVWLRRLNFRLHDDQ 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02059 540 PANTHER EXOSTOSIN FAMILY PROTEIN 106 537 - -
Bva13g02059 540 Coils Coil 159 179 - -
Bva13g02059 540 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 106 537 IPR004263 GO:0006486|GO:0016757
Bva13g02059 540 Pfam Exostosin family 208 489 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02059 Bva-Chr13 16360703 16363603 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02059 - - gmx:100806278 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02495 04 22635385 22638282 Bva13g02059 13 16360703 16363603 BWGD
Bva13g02059 13 16360703 16363603 Bva13g02059 13 16360703 16363603 ECH