Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01870 ATGAATGTGGTGGGCAAGGTTAGTAGCCTAATTACTCAAGGTGTCTACTCAGTTGCTACTCCTTTTCATCCCTTCGGTGGGGCTGTTGATATCATTGTTGTTCAGCAGCAAGATGGGACATTTCGGAGCACGCCATGGTATGTTCGTTTTGGTAAATTTCAGGGTGTTCTCAAAGGTGCTGAAAAGATTGTCCGTATAAATGTTAATGGCGTTGAAGCAAACTTCCACATGTATCTAGACAATTCTGGGGAGGCTTATTTTGTAAAGGGGGTGGATGATGATAAAGGAATTGTGTCAAATGGGGTTGTTGAAGATTCTGATAATTCTCAATTTACCCGAGAGGGTGGTGATAtggaatttgataaaaaagataatggtaATCTGATTATTGACGATACTCATATTCATAGACTTGATCATAGTGTCTCTGATACAGGAGTTCTTCAGTTGAAAGATGAAGGTGATTCCTCGGATGTGCCTTGCATTCAAAGGGCAGAATCTGATGGTGATAGGAGATATTATGAATTCCAAGAGGAGCAATCTTCTTTTGAAGATTCAGTTGGGTTATCAGAATATGGGTCTGCTCGGTATGGCAATCTAGATGGAGAAAATTCAGAGATGGTTTTAGTGAGTGTGGATGGTCACATATTGATGGCCCCTATCTCAGAATCAGAGCAGAATACAGAGAATGTAGAGTTAAGGAATCCCCAATTTCATCTGGGCCCCGGTGAGGGGTCTGAATTGTGTGAAGGCAATGATGAATTTATTTCTGGTGAAAATGCTTGGGCTgctgaatatataaataagctGGATGTTTCAACGGTGGGTTGTCACCATACTAACTGTAATGATAATGTTTCTGGGCTCCAGCAGGACAGCTGTCAAGGAGAAGAGGAACATATTATTCAAGTGAAGGAAACCTTCAAGATTGAAGATCAAGgagaaaatattcttcttaGGCGAACTCATTCAGGAGAGGTTGCAACTGGTATCAGGAGGGAGGATGTCTTCAAAAGCTGTTTGGAGCTACAAGAATTAGCTCAGCTGGCTGGAGGTTCTTCATCAGAGTTTCGACATTCAGCAGGGGAATCTAATGCAAATAGTCCAGTAGCCATCGAAAACGAACAAGGGAGCATTGtacaaaataagaatattgatCACTTACCTTCCCCTAGTGGTTCTGCTTCTCCACGTGACAATAGATCTCCAAATTCTGAATTGGGGCATCAAGAGGTTGAGGAAAAGGTGTCAGGGGTAGTTGACTCTGGTTATGGCAATCTTTCTGTCACCAATAATGCTGAATGGAACAATGAGCATATTGGGAATTCAGCACCAGTTGAAGGGGTAGATGATAGTCAACAAGCTGCTGCACCTGAAGATGATAGTAATGTAAGTGAGCAAGTGGAACCTCAAATAGCAACTTCTGATGAAGGGAACCAAAGTAATTCAGGTTTAAGACTTGAAATCTCACTTTGTGGCCATGAACTTAAAGCGGGTATGGGTTTGGCTGCTGCCTCTGAAGCCTTTGAAGCGCACCGGATATCTGCAGAGGTATTTAGAAGTTCTGCACCATCCCtaattaagaatgaaaatcTTATTGTTAAGTTTAAAGGGAGGTACTTGCCATGGGAAAAGGCTGCCCCCCTTGTTCTAGGGATGGCTgcatttggttttgaaataCCTGTTGAGCCCAAAGATACAGTTCCTGTGGAACAGGATGATGTACTCAAGTCCAGAGATGATGATCCTGGATCCACTTCATCTGGACGGAGATGGAGACTATGGCCTATCCCTTTTCGAAAAGTCAAAACACTTGAGCACACCAGTAGCAACTCATCtaatgaagagatatttgtAGATTCTGAGTCTGGCTTGCAAAATTCTAGTATAGAGCAAACTCCAACATCCAGCAACCATGCATCTCCTAAGAAGCAATTCATAAGGACAAATGTTCCCACTAATGAGCAGATAGCCTCTTTGGATCTGAAGGATGGTCAAAATTTTGTGACCTTTAGTTTCTCTACCAGGGTTCTTGGAACACAACAGGTTGATGCTCATATATACTTATGGAAGTGGAATGCAAGAATTGTAATCTCAGATGTTGATGGAACTATCACCAAGTCTGATGTTTTGGGGCAGTTCATGCCTTTAGTTGGCAAAGATTGGACACAGTCTGGAGTGGCAAAGCTTTTCTCTGCCATTAAGGAAAATGGATACCAGCTACTGTTTTTGAGTGCCCGTGCAATAGTCCAGGCATATCTGACCAGGAGCTTTTTGCTTAACCTGAAACAGGACGGAGAAGCGTTACCAAATGGACCTGTTGTCATTTCACCAGATGGATTATTTCCCTCACTTTTCCGAGAAGTAATAAGAAGAGCTCCACATGAATTCAAGATAGCTTGTCTAGAGGATATTAAGAAACTTTTCCCTGCTGACTACAATCCATTTTACGCGGGATTTGGCAATAGAGACACAGATGAACTTAGCTACAGGAAGATTGGAATCCCCAAgggcaaaatttttattatcaacccTAAGGGCGAGGTGGCTATAAGTCATCGTATCGACGCAAAGTCGTACACATCACTTCACACACTGGTGAATGACATGTTTCCTCCAACTTCTATGGTTGAGCAGGAGGACTTCAACTCGTGGAACTATTGGAAAATGCCATTGCCAGAGGTTGAATA 2690 0.4067 MNVVGKVSSLITQGVYSVATPFHPFGGAVDIIVVQQQDGTFRSTPWYVRFGKFQGVLKGAEKIVRINVNGVEANFHMYLDNSGEAYFVKGVDDDKGIVSNGVVEDSDNSQFTREGGDMEFDKKDNGNLIIDDTHIHRLDHSVSDTGVLQLKDEGDSSDVPCIQRAESDGDRRYYEFQEEQSSFEDSVGLSEYGSARYGNLDGENSEMVLVSVDGHILMAPISESEQNTENVELRNPQFHLGPGEGSELCEGNDEFISGENAWAAEYINKLDVSTVGCHHTNCNDNVSGLQQDSCQGEEEHIIQVKETFKIEDQGENILLRRTHSGEVATGIRREDVFKSCLELQELAQLAGGSSSEFRHSAGESNANSPVAIENEQGSIVQNKNIDHLPSPSGSASPRDNRSPNSELGHQEVEEKVSGVVDSGYGNLSVTNNAEWNNEHIGNSAPVEGVDDSQQAAAPEDDSNVSEQVEPQIATSDEGNQSNSGLRLEISLCGHELKAGMGLAAASEAFEAHRISAEVFRSSAPSLIKNENLIVKFKGRYLPWEKAAPLVLGMAAFGFEIPVEPKDTVPVEQDDVLKSRDDDPGSTSSGRRWRLWPIPFRKVKTLEHTSSNSSNEEIFVDSESGLQNSSIEQTPTSSNHASPKKQFIRTNVPTNEQIASLDLKDGQNFVTFSFSTRVLGTQQVDAHIYLWKWNARIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGEALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPADYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAISHRIDAKSYTSLHTLVNDMFPPTSMVEQEDFNSWNYWKMPLPEVE 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01870 896 MobiDBLite consensus disorder prediction 456 483 - -
Bva13g01870 896 Pfam LNS2 (Lipin/Ned1/Smp2) 650 872 IPR013209 -
Bva13g01870 896 Pfam lipin, N-terminal conserved region 1 98 IPR007651 -
Bva13g01870 896 SMART lns2 696 852 IPR031315 -
Bva13g01870 896 MobiDBLite consensus disorder prediction 623 643 - -
Bva13g01870 896 PANTHER PHOSPHATIDIC ACID PHOSPHOHYDROLASE 1 895 - -
Bva13g01870 896 PANTHER LIPIN 1 895 IPR026058 -
Bva13g01870 896 MobiDBLite consensus disorder prediction 437 483 - -
Bva13g01870 896 MobiDBLite consensus disorder prediction 383 403 - -
Bva13g01870 896 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 488 595 IPR031703 -
Bva13g01870 896 MobiDBLite consensus disorder prediction 569 587 - -
Bva13g01870 896 SUPERFAMILY HAD-like 688 838 IPR036412 -
Bva13g01870 896 MobiDBLite consensus disorder prediction 383 411 - -
Bva13g01870 896 MobiDBLite consensus disorder prediction 569 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01870 Bva-Chr13 15318174 15323818 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01870 K15728 - gmx:100798304 1230.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02654 04 23405012 23410689 Bva13g01870 13 15318174 15323818 BWGD