Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01780 atgTTTTTTGATGGGTATGGGTATCAAGGGGCATCATTTGAGCAGACATACCAATGTTACCCTGCTGCTTTTATTGAAAAGCCTCAACTTGAAACTGGTGATAAAGTTATAATGCCTCCTTCGGCCCTCGACCGTCTTGCATCTTTACATGTTGATTATCCAATGTTGTTTGAACTCCGAAATAATGATGTTGGGAGGGTTTCCCATTGTGGGGTTCTGGAGTTCATTGCTGAGGAAGGAGTGATGTATATGCCATATTGGATGATGGAAAACATGCTTCTGCAAGAAGGGGACATTGTAAGGGTGAAAAATGTGACACTTCCCAAGGGAACTTATGTTAAATTACAACCCCACACAAAggatttcttaaatatttccGATCCAAAAGCTATATTAGAGACCagtttgagaaaattttcctGCTTGACCACTGGGGATACTATCATGGTGGAATACAAcaacagaaaatatttcatagaTATCTTAGAAACCAAGCCTGCTAATGCTGTAAGCATCATTGAGACTGACTGCGAGGTGGATTTCGCTCCTCCATTGGATTATAAGGAACCCAGAAAGCGTGTTGCAGCAGCTGAGAGCCAAGTTGAAACTCAACCGAAATTTAATCCATTTTCTGGAACTGCACGACGCTTGGATGGAAAACTCTTGGAGTATCAACTTCCCAGAGAGCCTTCTCCGAGGTCGAAAGACAACAGATCTCGTGTTTCCAATGGCAATGCAGAGTCTTCTACAGCACGAGGCAATCAAGGAAATGCTCGTCAATCTCAGGGAAGGCTTGTCTTTGGATCAGATGTATACCGTAGTAAAGAAACAGGACAGGAAAAACAGACAAAACAAGAGTTTCCCTCATA 869 0.4016 MFFDGYGYQGASFEQTYQCYPAAFIEKPQLETGDKVIMPPSALDRLASLHVDYPMLFELRNNDVGRVSHCGVLEFIAEEGVMYMPYWMMENMLLQEGDIVRVKNVTLPKGTYVKLQPHTKDFLNISDPKAILETSLRKFSCLTTGDTIMVEYNNRKYFIDILETKPANAVSIIETDCEVDFAPPLDYKEPRKRVAAAESQVETQPKFNPFSGTARRLDGKLLEYQLPREPSPRSKDNRSRVSNGNAESSTARGNQGNARQSQGRLVFGSDVYRSKETGQEKQTKQEFPS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01780 289 Pfam Ubiquitin fusion degradation protein UFD1 13 184 IPR004854 GO:0006511
Bva13g01780 289 PANTHER UBIQUITIN FUSION DEGRADATION PROTEIN 1 HOMOLOG 1 281 - -
Bva13g01780 289 MobiDBLite consensus disorder prediction 237 264 - -
Bva13g01780 289 MobiDBLite consensus disorder prediction 223 289 - -
Bva13g01780 289 Gene3D - 109 182 - -
Bva13g01780 289 Gene3D - 6 107 IPR042299 -
Bva13g01780 289 PANTHER UBIQUITIN FUSION DEGRADATON PROTEIN 1 1 281 IPR004854 GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01780 Bva-Chr13 14360953 14365813 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01780 K14016 - qsu:111996619 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01780 13 14360953 14365813 Bva13g01780 13 14360953 14365813 ECH