Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01770 ATGGCGGCTTCTGCAACTCTTCTAAAGTCATCCCCAGTTCTTGAAAAGTCTGAGTGGGTCAAGGGCCAGAGCCTGCGCCAACCTTCAGTTTCTGTTGTTCGTTGCAGCCCCATCACCGCCCCCTCAGCACTCACCATTAGAGCTGGTTCCTACGCCGATGAGCTCGTCAAGACCGCGAAAACTATTGCCTCTCCAGGGCGTGGTATCTTGGCCATGGATGAGTCTAACGCTACCTGCGGGAAGCGTTTGGCCTCAATTGGGCTTGAGAACACTGAGGCTAACCGCCAAGCATACCGCACCCTTCTTATCACAGCTCCTGGCCTTGGTCAGTACATCTCTGGTGCCATTCTCTTTGAGGAAACTCTATACCAATCCACAACTGATGGCAGGAAAATGGTTGATGTCCTCACTGAGCAAAACATTGTCCCCGGTATCAAAGTCGACAAGGGTTTGGTTCCCTTGGTTGGTTCCAACGACGAGTCATGGTGCCAAGGTCTTGACGGTCTTGCCTCTCGCTCAGCTGCATACTACCAGCAAGGTGCTCGTTTCGCCAAATGGCGTACCGTTGTGAGCATCCCCAATGGTCCCTCTGCTCTGGCAGTCAAGGAAGCAGCTTGGGGTCTGGCTCGCTATGCCGCCATTTCCCAGGACAATGGGTTGGTCCCAATTGTGGAGCCAGAGATCTTGCTGGATGGTGAACACAGCATTGACAGGACTTTCGAAGTGGCTCAGAAGGTGTGGGCTGAGGTTTTCTTCTACCTTGCCGAGAACAATGTCACGTTTGAGGGTATACTCCTCAAGCCTAGCATGGTTACTCCAGGAGCTGAGTCCAAGGAGAAGGCTTCTCCTGAGACAGTTGCTGCATACACCCTCAATCTCCTTCACAGGAGAATCCCCCCTGCTGTCCCTGGAATCATGTTTTTGTCTGGTGGGCAATCTGAGGTTGAAGCAACCTTGAACTTGAATGCGATGAACCAAAGTCCCAACCCATGGCATGTGTCTTTCTCATATGCCAGAGCCCTCCAAAACACTGCCTTGAAGACATGGGGAGGCAGACCAGAGAATGTGAAGGCAGCACAGGATGCACTCCTTCAACGCGCCAAGTCCAACTCTCTTGCTCAGCTCGGAAAGTACACCGGCGAGGGTGAATCCGAGGAGGCCAAGAAGGAATTGTTCGTCAAGGGCTATACCTACTA 1196 0.5268 MAASATLLKSSPVLEKSEWVKGQSLRQPSVSVVRCSPITAPSALTIRAGSYADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLITAPGLGQYISGAILFEETLYQSTTDGRKMVDVLTEQNIVPGIKVDKGLVPLVGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHSIDRTFEVAQKVWAEVFFYLAENNVTFEGILLKPSMVTPGAESKEKASPETVAAYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTALKTWGGRPENVKAAQDALLQRAKSNSLAQLGKYTGEGESEEAKKELFVKGYTY 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01770 398 Gene3D Aldolase class I 37 397 IPR013785 -
Bva13g01770 398 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 259 269 IPR029768 -
Bva13g01770 398 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 37 398 IPR000741 GO:0004332|GO:0006096
Bva13g01770 398 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 37 398 - -
Bva13g01770 398 CDD FBP_aldolase_I_a 52 378 - -
Bva13g01770 398 SUPERFAMILY Aldolase 44 398 - -
Bva13g01770 398 Pfam Fructose-bisphosphate aldolase class-I 54 398 IPR000741 GO:0004332|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01770 Bva-Chr13 14310398 14313896 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01770 51 398 Miscellaneous Gene Families AT3G52930 56.250 1.79e-135 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01770 K01623 - gmx:100775844 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01770 13 14310398 14313896 Bva13g01770 13 14310398 14313896 ECH