Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01768 atgagttCAGACAGCAGAAGCCGGAGCAGAAGCCGTAGCAGGAGCCCTATGGATCGTAAGATCCGATCAGATCGATTTTCCTATCGTGATGCGCCTTACAGGAGAGATTCACATCGGGGTTTCAGCCGGGACAATTTGTGCAAGAACTGCAAAAGGCCGGGTCATTATGCTAGAGAATGCCCAAATGTTGCAATTTGCCACAATTGTGGCCTCCCCGGGCACATTGCTTCTGAATGCACCACAAAATCGCTATGCTGGAATTGTCGAGAACCTGGACACATGGCCAGCAACTGTCCAAACGAGGGCATTTGCCATACTTGTGGTAAAGCTGGACATCGTGCTAGAGAATGCACAGCCCCTCCAATGCCTCCAGGGGACCTAAGACTGTGTAACAACTGTTACAAGCAGGGCCACATTGCTGCAGACTGTACAAATGAGAAGGCGTGTAACAATTGTAGGAAAACAGGTCATCTGGCACGAGATTGTCAAAATGACCCTATTTGCAACTTGTGCAATGTATCTGGGCATGTCGCTAGACAGTGTCCAAAAGCCAATGTTCTAGGAGATCgcagtggtggtggtggtggtggagctGGCGGTGGGGTTCGTGGCAGTGGTTTCCGAGACGTTGTATGCAGGAATTGCCAGCAATTGGGTCACATGAGCAGAGATTGCATGGGGCCATTGATGATCTGTCACAATTGTGGAGGGCGAGGACATCTGGCGTATGAGTGCCCTTCGGGTCGCTATATGGATCGTTACTCCAGGAGGTACTG 776 0.4832 MSSDSRSRSRSRSRSPMDRKIRSDRFSYRDAPYRRDSHRGFSRDNLCKNCKRPGHYARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASNCPNEGICHTCGKAGHRARECTAPPMPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCQNDPICNLCNVSGHVARQCPKANVLGDRSGGGGGGAGGGVRGSGFRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRYMDRYSRRY 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01768 258 Gene3D - 202 249 - -
Bva13g01768 258 SUPERFAMILY Retrovirus zinc finger-like domains 124 165 IPR036875 GO:0003676|GO:0008270
Bva13g01768 258 Pfam Zinc knuckle 103 118 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 Pfam Zinc knuckle 66 80 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 Pfam Zinc knuckle 85 100 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 Pfam Zinc knuckle 129 145 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 Pfam Zinc knuckle 231 247 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 Pfam Zinc knuckle 148 163 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 Pfam Zinc knuckle 167 183 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 Pfam Zinc knuckle 46 62 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 Pfam Zinc knuckle 211 225 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 ProSiteProfiles Zinc finger CCHC-type profile. 212 225 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 ProSiteProfiles Zinc finger CCHC-type profile. 66 79 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 Gene3D - 102 146 - -
Bva13g01768 258 Gene3D - 147 196 - -
Bva13g01768 258 PANTHER OS10G0545300 PROTEIN 1 258 - -
Bva13g01768 258 ProSiteProfiles Zinc finger CCHC-type profile. 168 183 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 ProSiteProfiles Zinc finger CCHC-type profile. 149 164 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 ProSiteProfiles Zinc finger CCHC-type profile. 232 247 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 SUPERFAMILY Retrovirus zinc finger-like domains 37 82 IPR036875 GO:0003676|GO:0008270
Bva13g01768 258 Gene3D - 82 101 - -
Bva13g01768 258 SUPERFAMILY Retrovirus zinc finger-like domains 205 249 IPR036875 GO:0003676|GO:0008270
Bva13g01768 258 PANTHER - 1 258 - -
Bva13g01768 258 ProSiteProfiles Zinc finger CCHC-type profile. 104 117 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 ProSiteProfiles Zinc finger CCHC-type profile. 130 145 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 ProSiteProfiles Zinc finger CCHC-type profile. 47 62 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 SUPERFAMILY Retrovirus zinc finger-like domains 83 121 IPR036875 GO:0003676|GO:0008270
Bva13g01768 258 Gene3D - 7 81 - -
Bva13g01768 258 ProSiteProfiles Zinc finger CCHC-type profile. 85 100 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 MobiDBLite consensus disorder prediction 1 29 - -
Bva13g01768 258 SMART c2hcfinal6 65 81 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 SMART c2hcfinal6 84 100 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 SMART c2hcfinal6 103 119 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 SMART c2hcfinal6 167 183 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 SMART c2hcfinal6 231 247 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 SMART c2hcfinal6 148 164 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 SMART c2hcfinal6 129 145 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 SMART c2hcfinal6 46 62 IPR001878 GO:0003676|GO:0008270
Bva13g01768 258 SMART c2hcfinal6 211 227 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01768 Bva-Chr13 14296390 14298637 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01768 K09250 - qsu:111996611 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01768 13 14296390 14298637 Bva13g01768 13 14296390 14298637 ECH