Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01763 ATGGGGAACTTGGGAGCATTACTAAAACACCCTGAAGAAATTTATCCATTGTTGAAGTTCAAGATGGCGATAAAGAATGCGAAGAAGCAGATACCAAAGAAGCCACACTGGGCTTTCTGCTACACTATACTTCACAAGGTGGCTGGCAGTTCTGCTTTCATCATTCAGCATCTTCATTCTGAGCTTCGTGATTCTATACTCATTCTTTATCTGGTTCTTAGAGCCTTGGACACAATTGGTGGAACTGATGACTGCAAGGTTCTTATGGAGCATTTCCATCATGTTCAAGTTGCTTTCTTGGATCTCAAGAAAAGTCATCAAGATGTGATTAAGGATACTACCAAAAAAAGATGGGAGCAGGAATGGCAAAATTTATCTATAGAGACAATTGAAGATCTAATTGAATATGCCCATCACGTGGCAGGTCTTGTAGGCATAAGACTATCTAGGCTATTTTACGCATCTGGATTAGAAGATTTGGCTCCAGATTCACTCTCAAATTCAACGGGCTTACTTCTTCAGATCCAAGTGTCTTTTAGATTTTGTGCCATTCCACAGGTGAAGGCAGTTGGAATTCTAGCTTTATGCTACAACAACACAGACGTTTTCAGAGTTTCTTTGAAGTTAAGGCGTGgTCTCATTGCTAAACTCTTCCACCAAATAAGGACAATGTCTGATGTATATGATTGCCTTTTGGAATTTACTTCTATTATCAAGGCTAAGGTTGAGATGCATGATCCTAACGCCTCAACTACACTGAACAGGCTAGATGCAATACAGAAAATCTGCAGGGAATCTAAACCCTTAAACCATAGTGGCAGGAAGTATTACGCAATGAGCAAAGAGCAAGGTTATCATTCAGTTTGGGTAAGATG 875 0.3989 MGNLGALLKHPEEIYPLLKFKMAIKNAKKQIPKKPHWAFCYTILHKVAGSSAFIIQHLHSELRDSILILYLVLRALDTIGGTDDCKVLMEHFHHVQVAFLDLKKSHQDVIKDTTKKRWEQEWQNLSIETIEDLIEYAHHVAGLVGIRLSRLFYASGLEDLAPDSLSNSTGLLLQIQVSFRFCAIPQVKAVGILALCYNNTDVFRVSLKLRRGLIAKLFHQIRTMSDVYDCLLEFTSIIKAKVEMHDPNASTTLNRLDAIQKICRESKPLNHSGRKYYAMSKEQGYHSVWVR 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01763 291 Gene3D Farnesyl Diphosphate Synthase 84 175 IPR008949 -
Bva13g01763 291 Gene3D Farnesyl Diphosphate Synthase 35 83 IPR008949 -
Bva13g01763 291 PANTHER FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASE 1 79 IPR044844 GO:0004311
Bva13g01763 291 PANTHER FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASE 81 174 IPR044844 GO:0004311
Bva13g01763 291 PANTHER FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASE 178 290 IPR044844 GO:0004311
Bva13g01763 291 PANTHER SQUALENE SYNTHASE-LIKE ISOFORM X1 178 290 - -
Bva13g01763 291 SUPERFAMILY Terpenoid synthases 36 263 IPR008949 -
Bva13g01763 291 Gene3D Farnesyl Diphosphate Synthase 176 263 IPR008949 -
Bva13g01763 291 ProSitePatterns Squalene and phytoene synthases signature 1. 136 151 IPR019845 GO:0016765
Bva13g01763 291 PANTHER SQUALENE SYNTHASE-LIKE ISOFORM X1 1 79 - -
Bva13g01763 291 PANTHER SQUALENE SYNTHASE-LIKE ISOFORM X1 81 174 - -
Bva13g01763 291 Pfam Squalene/phytoene synthase 50 175 IPR002060 GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01763 Bva-Chr13 14257377 14263620 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01763 K00801 - fve:101299914 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01763 13 14257377 14263620 Bva13g01763 13 14257377 14263620 ECH