Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01755 ATGGATCGAAACTACTCACTCTTCGTTGTCTTCTCCCTTCTCTTCGTCTCGGCGATCTCTTCGGAGATTGAAAATGTCGCCGTCGGGAGCAACGCAGAGCCGTTGATCCAGCAAGTGGTGGACGGCGATGGTGACCCTAGATTGGGAGCAGAGCACCATTTTTCTCTGTTCAAGCGTAGGTTTGGGAAATCTTACGCGTCTAAGGAAGAGCACGATTACAGGTTCAAGGTGTTTAGGGCTAATCTGCGCCGAGCTAGGCGGCACCAGAGCTTGGACCCTTCGGCAATTCACGGTGTAACTCAGTTCTCGGATTTGACTCCGTCCGAATTTCGGAAGCAAGTACTTGGTCTCAGAGGAGTTAGATTGCCTTCTGACGCAAACAAAGCTCCGATATTGCCGACTGATGATCTTCCTAGCAATTTTGATTGGAGAGATCATGGAGCTGTTACCCCCGTTAAGAATCAGGGTTCCTGTGGGTCATGTTGGAGTTTCAGCGCAACAGGGGCTCTGGAAGGGGCTCATTACCTTGCTACCGGAGAGCTGGTCAGCCTTAGCGAGCAGCAGCTCGTGGATTGTGATCATGAGTGTGATCCAGAAGAGCCAGGTTCTTGTGACGCTGGTTGTAATGGTGGACTGATGAATAGTGCTTTTGAATACATCCTTAAATCTGGTGGAGTTATGCGGGAGGAAGACTATCCTTACACAGGCTCTGATCGTGGAAGCTGCaattttgacaagaaaaagatTGCAGCATCAGTGGCAAACTTCAGTGTAGTCTCGCTTGATGAAGACCAGATTGCTGCAAATCTTGCGAAAAATGGTCCTCTTGCAGTGGCTATCAATGCAGTGTTTATGCAGACATACATTGGTGGGGTATCATGCCCATACATATGTTCAAGGAGGCTGGATCATGGGGTGTTGCTGGTGGGATATGGTTCTGCTGGCTATGCTCCTATTCGGATGAAGGAGAAACCATATTGGATCATCAAGAATTCATGGGGAGAGAATTGGGGAGAAAATGGTTACTACAAGATTTGCCGAGGACGAAACGTCTGTGGCGTGGACTCCATGGTTTCAACTGTGGCTGCTGTTCATGCCCCCTCTCACTA 1109 0.486 MDRNYSLFVVFSLLFVSAISSEIENVAVGSNAEPLIQQVVDGDGDPRLGAEHHFSLFKRRFGKSYASKEEHDYRFKVFRANLRRARRHQSLDPSAIHGVTQFSDLTPSEFRKQVLGLRGVRLPSDANKAPILPTDDLPSNFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGAHYLATGELVSLSEQQLVDCDHECDPEEPGSCDAGCNGGLMNSAFEYILKSGGVMREEDYPYTGSDRGSCNFDKKKIAASVANFSVVSLDEDQIAANLAKNGPLAVAINAVFMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGENWGENGYYKICRGRNVCGVDSMVSTVAAVHAPSH 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01755 369 PRINTS Papain cysteine protease (C1) family signature 326 332 IPR000668 GO:0006508|GO:0008234
Bva13g01755 369 PRINTS Papain cysteine protease (C1) family signature 304 314 IPR000668 GO:0006508|GO:0008234
Bva13g01755 369 PRINTS Papain cysteine protease (C1) family signature 155 170 IPR000668 GO:0006508|GO:0008234
Bva13g01755 369 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 302 312 IPR025660 -
Bva13g01755 369 Pfam Cathepsin propeptide inhibitor domain (I29) 54 110 IPR013201 -
Bva13g01755 369 SMART Inhibitor_I29_2 54 110 IPR013201 -
Bva13g01755 369 SUPERFAMILY Cysteine proteinases 52 361 IPR038765 -
Bva13g01755 369 Gene3D Cysteine proteinases 37 362 - -
Bva13g01755 369 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 155 166 IPR000169 -
Bva13g01755 369 CDD Peptidase_C1A 138 361 IPR039417 -
Bva13g01755 369 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 38 363 - -
Bva13g01755 369 SMART pept_c1 137 362 IPR000668 GO:0006508|GO:0008234
Bva13g01755 369 Pfam Papain family cysteine protease 137 360 IPR000668 GO:0006508|GO:0008234
Bva13g01755 369 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 326 345 IPR025661 -
Bva13g01755 369 PANTHER CYSTEINE PROTEASE RD19C-RELATED 38 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01755 Bva-Chr13 14165672 14168485 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01755 K01373 - zju:107426701 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01755 13 14165672 14168485 Bva13g01755 13 14165672 14168485 ECH
Bva13g01755 13 14165672 14168485 Bva14g02222 14 18705330 18707787 ECH