Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01603 ATGGAGACTAGTTCGGGCACACCCAGAAGGAAAAGTGGTGGAAATGGGCAGGTTCTGGACGGTTCGAATATAATGGAGTTAGTTGGAAACGAGGAAGTTTTCAGCAATTTCGTGGACCATAAGTTCCAGGAGCTGGATAGGGACAGAGATGGGAAGCTCTCTGTGAACGAGCTTGAGCCTGCTGTTGCTGATATTGGTGCTGCTCTTGGTTTGCCTGCTCAGGGAACCAACCCTGATTCTGATCACATATATTCTGAGGTGTTGAATGAATTCACCCATGGAAAGCAAGAGAAAGTAAGTAAGACTGAGTTCAAAGACGTTCTCTCGGACATTCTTTTGGGCATGGCTGCTGGGCTGAAACGAGACCCAATAGTGATACTTCGCATGGATGGGGAAGATCTTCTTGAGTTTGTCAATGGTCCAAGTTATGAGGCAGAGATGGTAGCCATATTCTCCCAAATTGAGTCCCCTAATGGATCGCTTCGCGATCATATAATTGAAGCTCTGGAGAAACTCACTGTTGATCAAGGAATTCCTCCTACTTCAGATTCTTGGgttTTTAACAATATTGTGGAACCAGTTCTGCAATCTCAAGCTGGCCCTGATTGGGATAAACCTGTCTCTCAAGGGACATTTTTGGAAGAATTCAAGAAAGTGGCATTGGCTGTGGCTGAACACCTTAAGGAGCAACCTGTTATTGTTGCCCACAGTGAAAACACCTTTGATGGAACTAGCATTAAGAGGCTATTATCCAACAAGTTTGAATTAGACAAGATATTGAACTCCGCTTTAGAAAATCTGCCAAAAGATCGCAATGGAAAAATATCAAAGGAGTTCCTGCGAGTGGCTCTGGACGTGGTTTCTCCCTCTGCCGGTTTGCCTCCACTTGGTGCAATTGAAGAGATGGATAAGGTTATTGGTGAAGTTTTCAAGATGATCAACGCAGACGATGGGAAGCAGGTTAAAGAGGATGAATTCAAGAAACTTTTAACTGAAATTCTGGGAAGTGTGATGTTGCAGTTAGAGGGCAATCCGATATCTGTTTCTTCAAATTCAGTTGTGCATGAGCCTCTAGGGTCTTCTTCTTCGCTTTTGCAGCCAGATTCTAGTGAAACAGCGTA 1121 0.4407 METSSGTPRRKSGGNGQVLDGSNIMELVGNEEVFSNFVDHKFQELDRDRDGKLSVNELEPAVADIGAALGLPAQGTNPDSDHIYSEVLNEFTHGKQEKVSKTEFKDVLSDILLGMAAGLKRDPIVILRMDGEDLLEFVNGPSYEAEMVAIFSQIESPNGSLRDHIIEALEKLTVDQGIPPTSDSWVFNNIVEPVLQSQAGPDWDKPVSQGTFLEEFKKVALAVAEHLKEQPVIVAHSENTFDGTSIKRLLSNKFELDKILNSALENLPKDRNGKISKEFLRVALDVVSPSAGLPPLGAIEEMDKVIGEVFKMINADDGKQVKEDEFKKLLTEILGSVMLQLEGNPISVSSNSVVHEPLGSSSSLLQPDSSETA 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01603 373 MobiDBLite consensus disorder prediction 1 19 - -
Bva13g01603 373 ProSiteProfiles EF-hand calcium-binding domain profile. 33 68 IPR002048 GO:0005509
Bva13g01603 373 Pfam EF-hand domain pair 41 106 IPR002048 GO:0005509
Bva13g01603 373 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 1 372 - -
Bva13g01603 373 SUPERFAMILY EF-hand 41 344 IPR011992 -
Bva13g01603 373 ProSitePatterns EF-hand calcium-binding domain. 46 58 IPR018247 -
Bva13g01603 373 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 372 - -
Bva13g01603 373 MobiDBLite consensus disorder prediction 1 21 - -
Bva13g01603 373 Gene3D - 31 338 - -
Bva13g01603 373 SMART efh_1 259 287 IPR002048 GO:0005509
Bva13g01603 373 SMART efh_1 37 65 IPR002048 GO:0005509
Bva13g01603 373 SMART efh_1 305 333 IPR002048 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01603 17 372 EF-hand Containing Proteins AT4G38810 67.967 6.18e-176 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01603 - - gmx:100787083 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01603 13 9606246 9610359 Bva13g01603 13 9606246 9610359 ECH