Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01598 ATGGGAGAAGTTGCTACCTCGAAAGGCGTCGAAAAGCGGACAAAACATGGCAAAGCTACAATTTTAGCTCTTGGCAAAGCTTTTCCTCACCAGCTTGTCATGCAAGAGTATTTAGTTGATGGATATTTCAGAGACACCAACTGTGATAATCCAGAACTCAAGCAGAAGCTAACTAGACTTTGTAACTCTATCACCCCCTtccttACAACCACAGTTAGAACAAGGTACGTGGTAATGTCCGAAGAGATACTAAAAAAGTACCCAGAACTAGCCGTTGAAGGGCTCCCCACAGTGAAGCAACGGCTAGAAATATGCAACGAAGCAGTAACAGAAATGGCAATCCAAGCTTCCCAAGCTTGTTTGAAGAACTGGGGAAGACCCTTATCAGAGATAACCCACTTGGTTTATGTGTCTTCAAGTGAAGCAAGATTGCCTGGTGGTGACCTTCACCTAGCAAGAGGACTGGGACTGAGCCCTGAGACTCAAAGGGTCATGCTCTATTTCATGGGCTGCTCCGGTGGCGTGGCTGGTCTCCGGGTAGCCAAGGACATAGCTGAGAACAACCCCGGCAGCCGGGTGCTGCTGGCGACTTCTGAGACTACAATTATTGGGTACAAGCCACCAAGTGCAGATAGACCTTATGATCTTGTTGGGGTGGCACTGTTTGGGGATGGTGCTGGTGCCATGGTAATTGGCTCAGACCCATTGATTGGAATTGAAAGGCCACTATTTGAGCTTCACACTGCTATCCAAGAGTTTCTGCCAAACACCCAGAACAAAATTGATGGGAGGTTAACAGAGGAGGGAATAAGCTTCAAGCTAGCAAGGGAGCTTCCTCAGATAATTGAAGACAACATTGAGGGATTCTGTGAAAAGTTAATGGAAGCTGCTGGCTTTCAGAGCAAGAACTACAATGAGATCTTCTGGGCAGTTCATCCAGGTGGCCCTGCAATCTTGAATCGAATTGAAAAGCGACTCAATTTGTCACCGGAGAAGCTGAATGCAAGTAGAAGAGCTCTCATGGATTATGGGAATGCTAGTAGCAATACCATAGTCTATGTGCTGGAGTACATGATGGAAGAGAATCTCAAGATCACAAGGGATGAAGGAGGAGATGGTGAATGGGGTTTGATTCTGGCATTTGGACCTGGGATTACTTTTGAGGGAATTGTAGCCAGGAATCTTGCTGCTTG 1193 0.4635 MGEVATSKGVEKRTKHGKATILALGKAFPHQLVMQEYLVDGYFRDTNCDNPELKQKLTRLCNSITPFLTTTVRTRYVVMSEEILKKYPELAVEGLPTVKQRLEICNEAVTEMAIQASQACLKNWGRPLSEITHLVYVSSSEARLPGGDLHLARGLGLSPETQRVMLYFMGCSGGVAGLRVAKDIAENNPGSRVLLATSETTIIGYKPPSADRPYDLVGVALFGDGAGAMVIGSDPLIGIERPLFELHTAIQEFLPNTQNKIDGRLTEEGISFKLARELPQIIEDNIEGFCEKLMEAAGFQSKNYNEIFWAVHPGGPAILNRIEKRLNLSPEKLNASRRALMDYGNASSNTIVYVLEYMMEENLKITRDEGGDGEWGLILAFGPGITFEGIVARNLAA 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01598 397 Pfam Chalcone and stilbene synthases, N-terminal domain 10 235 IPR001099 -
Bva13g01598 397 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 12 395 IPR011141 GO:0009058|GO:0016747
Bva13g01598 397 CDD CHS_like 19 391 - -
Bva13g01598 397 Pfam Chalcone and stilbene synthases, C-terminal domain 245 395 IPR012328 -
Bva13g01598 397 PANTHER TYPE III POLYKETIDE SYNTHASE B 12 395 - -
Bva13g01598 397 PIRSF PKS_III 4 397 IPR011141 GO:0009058|GO:0016747
Bva13g01598 397 SUPERFAMILY Thiolase-like 16 237 IPR016039 GO:0016746
Bva13g01598 397 SUPERFAMILY Thiolase-like 242 393 IPR016039 GO:0016746
Bva13g01598 397 Gene3D - 2 242 IPR016039 GO:0016746
Bva13g01598 397 Gene3D - 243 394 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01598 Bva-Chr13 9568478 9570226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01598 93 382 Miscellaneous Gene Families AT4G34250 26.480 1.69e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01598 - - qsu:112008420 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01598 13 9568478 9570226 Bva13g01598 13 9568478 9570226 ECH