Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01597 ATGAGAACTCAGAGGAAGCCGATCCAGGCCGTCGCGACATGGGTGAGGCGGCAGCCCCCAAAGGTGAAGGCCTTTCTCGCCGTCGTTTCTGGCATGGCCGCTCTGGTGCTGCTTCGTTTCATTGTTCATGATCATGATAATCTCTTCGTCGCAGCTGAGGCCGTGCACTCTATTGGAATTTCTGTTCTAATCTACAAGCTCATGAAGGAGAAGACATGTGCAGGACTATCACTCAAATCCCAGGAATTAACAGCTATCTTTTTAGCTGTTAGGCTGTACTGCAGTTTTGTTATGGAATATGATATACACACACTACTTGATCTAGCTACTCTAGCAACAACTCTGTgggttatatatatgattcgTTTCAAACTTAGGGCTAGTTACATGGAGGAGAAGGACAATTTTGCAATATATTATGTGGTGATACCCTGTGCTGTGTTAGCCTTGTTCATTCATCCAACAACTTCTCATCATTTCCTGAACAGGATTTCCTGGGCATTCTGTGTGTATCTAGAAGCTGTTTCAGTGTTACCCCAACTGCGAGTCATGCAGAACACTAAaATTGTTGAACCATTCACAGCTCATTATGTATTTGCACTGGGTGTTGCAAGATTCCTAAGCTGTGCTCATTGGGTTCTTCAGGTGTTAGATAGTCGTGGACATTTGTTGGTTGCACTGGGCTATGGTTTATGGCCTTCAATGGTTCTTATCTCAGAAATTGTTCAGACTTTTATCTTAGCAGATTTCTGCTATTACTATGTCAAAAGTGTCTTTGGTGGACAGCTTGTTCTCCGTCTTCCCTCTGGAGTCGTGTG 818 0.4315 MRTQRKPIQAVATWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFKLRASYMEEKDNFAIYYVVIPCAVLALFIHPTTSHHFLNRISWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01597 272 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016021|GO:0046923
Bva13g01597 272 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016021|GO:0046923
Bva13g01597 272 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016021|GO:0046923
Bva13g01597 272 PRINTS ER lumen protein retaining receptor signature 202 220 IPR000133 GO:0006621|GO:0016021|GO:0046923
Bva13g01597 272 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016021|GO:0046923
Bva13g01597 272 Pfam ER lumen protein retaining receptor 72 214 IPR000133 GO:0006621|GO:0016021|GO:0046923
Bva13g01597 272 PANTHER ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED 1 271 - -
Bva13g01597 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 1 271 IPR000133 GO:0006621|GO:0016021|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01597 Bva-Chr13 9565156 9568201 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01597 3 272 Miscellaneous Gene Families AT4G38790 89.259 0.0 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01597 - - pvy:116118170 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01597 13 9565156 9568201 Bva13g01597 13 9565156 9568201 ECH