Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01596 ATGGCAGTAACCTCAACATCACTCTCCGTTCCCAAATCCATCTCTTCACCCTCCGTTGGCCCCACTTTTTCCGGCCTTCGTCGATCCCCTCCGTCATTCCCTTCATCTACTCACTCATTCTTCGAGAATGTTCACTCCAATCTCCGTCTATCCTCCGCTCGCAAAGCTTGCCGTGGTGTCATCGCCATGGCCGGCACTGGCAAGTTCTTCGTTGGTGGAAACTGGAAGTGTAATGGGACAAAAGACTCTATCAGCAAGCTTGTCTCTGACTTGAACAGTGCAAAATTGGAGCCTGATGTTGATGTTGTTGTTGCACCTCCCTTTGTGTACATCGATCAGGTGAAAAGCTCGCTCATAGATCGGATTGAGGTATCTGCTCAGAACTCTTGGGTAGGAAAAGGTGGGGCTTTCACTGGAGAAATCAGTGTGGAACAACTAAAAGACCTTGGCGTCAAGTGGGTTATCCTTGGACATTCTGAACGAAGGCATGTAATAGGAGAAAATGATGAGTTTATAGGAAAGAAAGCTGCCTATGCTTTGAGTGAGGGTCTTGGAGTGATAGCGTGCATTGGGGAACTGTTACAGGAAAGGGAAGCTGGGAAAACTTTTGATGTTGTTTTCCAGCAAATGAAAGCATTTGCAGACTCAGTGCCTAGTTGGGATAATATAGTTATTGCATATGAGCCTGTATGGGCTATTGGAACTGGCAAAGTGGCCACACCCCAACAAGCTCAGGAAGTACATGTAGCTGTTCGCGATTGGCTAAAGAAGAATGTCTCTGCTGAAGTTGCATCCAAAACACGAATTATTTATGGAGgGTCTGTAAATGGGAGCAACTGTGCAGAGCTTGCCAAGCAAGAAGACATTGATGGATTTCTTGTTGGTGGTGCTTCATTGAAGGGTCCTGAGTTTGCTGTCATAGTCAATTCAGTGACATCCAAAAAAGTTGCAGCTTA 956 0.4603 MAVTSTSLSVPKSISSPSVGPTFSGLRRSPPSFPSSTHSFFENVHSNLRLSSARKACRGVIAMAGTGKFFVGGNWKCNGTKDSISKLVSDLNSAKLEPDVDVVVAPPFVYIDQVKSSLIDRIEVSAQNSWVGKGGAFTGEISVEQLKDLGVKWVILGHSERRHVIGENDEFIGKKAAYALSEGLGVIACIGELLQEREAGKTFDVVFQQMKAFADSVPSWDNIVIAYEPVWAIGTGKVATPQQAQEVHVAVRDWLKKNVSAEVASKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFAVIVNSVTSKKVAA 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01596 318 CDD TIM 69 309 IPR000652 GO:0004807
Bva13g01596 318 MobiDBLite consensus disorder prediction 1 30 - -
Bva13g01596 318 SUPERFAMILY Triosephosphate isomerase (TIM) 66 310 IPR035990 GO:0004807
Bva13g01596 318 PANTHER TRIOSEPHOSPHATE ISOMERASE, CHLOROPLASTIC 18 316 - -
Bva13g01596 318 PANTHER TRIOSEPHOSPHATE ISOMERASE 18 316 IPR000652 GO:0004807
Bva13g01596 318 ProSitePatterns Triosephosphate isomerase active site. 226 236 IPR020861 GO:0004807
Bva13g01596 318 ProSiteProfiles Triosephosphate isomerase (TIM) family profile. 68 310 IPR000652 GO:0004807
Bva13g01596 318 TIGRFAM tim: triose-phosphate isomerase 70 300 IPR000652 GO:0004807
Bva13g01596 318 Gene3D Aldolase class I 46 317 IPR013785 -
Bva13g01596 318 Pfam Triosephosphate isomerase 70 310 IPR000652 GO:0004807
Bva13g01596 318 Hamap Triosephosphate isomerase [tpiA]. 67 310 IPR022896 GO:0004807|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01596 Bva-Chr13 9556705 9561079 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01596 K01803 - ini:109165144 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01596 13 9556705 9561079 Bva13g01596 13 9556705 9561079 ECH