Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01582 ATGTCGAGCATCGTCAAGGAGATCCTGGCGGGCCCGATACAGATGGCGGACCAGGTGACGAAGCTGGCGGATGAGGCGCAAAGCTTCAAGCAAGAATGTATGGAGATTAAGGGGAAAACAGAGAAGCTTGCTGGATTGCTCCGGCAAGCGGCGAGAAACAGCAATGACCTCTACGAGCGCCCTACACGGCGGATCATCGACGACACCGAGCAAGTCCTTGACAAAACTCTTGCGCTTATCAGCAAGTGTAGCGGCAATGGCATCATCAAACGGCTTTTTACCATTATTCCGGCCGGTGCGTTTCGCAAGACCACTATGCAGTTAGAGAATTCCCTTGGAGATGTGCAGTGGCTTCTCCGCGTCTCTGCTTCTGCCGATGATCGTGACGATGAGTATCTGGGTTTGCCCCCAATCGCCGCCAACGAGCCCATTCTCTGTCTTATTTGGGAACAGGTTGCCATTTTGCTTTCTGGGTGTCCGTCGGAGGAGCGTTCCGACGCCGCTGCTTCACTGGTTTCCTTGGCACGGGACAACGATCGGTATGGTAAATTGATTATCGAAGAAGGTGGGGTGCCACCGCTTCTGAAATTGTTGAAAGAAGGGCAGATGGAAGGTCAAGAAAATGCTGCCAGAGCAATTGGTTTACTTGGGAGAGACCCAGAAAGCGTCGAACACATTGTCAATGCTGGGGTTTGCTCTGTGTTTGCGAAAATCCTCAAAGACGGTGCTATGAAAGTGCAGTGCGTGGTTGCATGGGCTATCTCGGAGTTGGCAGCAAACCACCCTAAATGCCAAGACCACTTTGCTCAGAACAATGCCATTCGATTGCTCGTGAGGCATCTTGCATTTGAGACCATTCAGGAGCACAGCAAGTACGCCATTGGCAATAAGCAAAACATGTCGATTCATTCAGTTTTGATGGCAAGCAATGCCCCAGATGCTGATAATAAGATGCCAGAAGACGAAACCCAAATTGCTCACCCATTGGGGAAACAAATGCCCAACCAGATGCACAATGTGGTGACAAACACCCTGGTCATGAAGGGTCAAACTCCTGGAAATTCCAAGACAGAAGCGCACCAGCAGCATCATGGCCATGGCGATAATGCCAGAGGCAGCGGCAGCCACCATAATCAAAACCCAAAGCACCAGCACCATAATGCCCATGTTTCAATAGCAGGGACCAGCTTGAAAGGGAGAGAATACGAAGACCCAGTGACCAAAGCCCAGATGAAAGCCATGGCAGCCAGAGCCCTGTGGCAACTCTCAAGAGGAAACTTCACCATTTGCCAAGACATCACCGAATCAAGAGCTCTTCTGTGCTTTTCTGTTCTATTAGAAAAAGGTCCAGATGATGTCAAGTCCTATTCTGGCAGAGCATTGATGGAAATCACTGCTGTTGCAGAGCAGCATCCAGAACTGAGACGCTCTGCTTTCAAACCAACTTCCCCAGCTGCTAAAGCTGTTGTAGAACAATTCATTAAAGTCATTGAAAAAGCAGACTCTGATCTTCTCATTCCCTGCATCAGAGCCGTGGGAAATCTGGCAAGAACTTTCAGAGCAACAGAGACCAGAATCATTCCCCCACTGGTGAAGCTATTGGACGAAAGAGAACCAGAGGTATCCACAGAAGCAGCCATTGCTCTCAACAAGTTTGCTTGTACGGACAACTTTCTCCATGAGAATCACTGCAACGCCATTATACAAGCAGGTGGGGCAAAGCATTTGATCCAACTAGTTTACTTCGGGGAACAAATGGTTCAAATTCCAGCCTTAACTCTTCTATGTTACATAGCACTTCATGTCCCCAAAAGTGAGACTCTTGCCCAAGAAGAAGTGCTTATAGTTCTTGAGTGGTCTACAAAGCAAGCCCATCTCATAGGTGTATCCTCCATTGAAGCACTTCTGCCAGAAGCTAAAAGTAGATTGGAACTGTATCAGTCAAGAGGTACAAGAGGATTCCATTG 1967 0.4865 MSSIVKEILAGPIQMADQVTKLADEAQSFKQECMEIKGKTEKLAGLLRQAARNSNDLYERPTRRIIDDTEQVLDKTLALISKCSGNGIIKRLFTIIPAGAFRKTTMQLENSLGDVQWLLRVSASADDRDDEYLGLPPIAANEPILCLIWEQVAILLSGCPSEERSDAAASLVSLARDNDRYGKLIIEEGGVPPLLKLLKEGQMEGQENAARAIGLLGRDPESVEHIVNAGVCSVFAKILKDGAMKVQCVVAWAISELAANHPKCQDHFAQNNAIRLLVRHLAFETIQEHSKYAIGNKQNMSIHSVLMASNAPDADNKMPEDETQIAHPLGKQMPNQMHNVVTNTLVMKGQTPGNSKTEAHQQHHGHGDNARGSGSHHNQNPKHQHHNAHVSIAGTSLKGREYEDPVTKAQMKAMAARALWQLSRGNFTICQDITESRALLCFSVLLEKGPDDVKSYSGRALMEITAVAEQHPELRRSAFKPTSPAAKAVVEQFIKVIEKADSDLLIPCIRAVGNLARTFRATETRIIPPLVKLLDEREPEVSTEAAIALNKFACTDNFLHENHCNAIIQAGGAKHLIQLVYFGEQMVQIPALTLLCYIALHVPKSETLAQEEVLIVLEWSTKQAHLIGVSSIEALLPEAKSRLELYQSRGTRGFH 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01582 655 Gene3D - 394 635 IPR011989 -
Bva13g01582 655 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 189 231 IPR000225 GO:0005515
Bva13g01582 655 Pfam Armadillo/beta-catenin-like repeat 219 259 IPR000225 GO:0005515
Bva13g01582 655 Pfam Armadillo/beta-catenin-like repeat 184 215 IPR000225 GO:0005515
Bva13g01582 655 PANTHER ARMADILLO REPEAT ONLY 1 1 655 - -
Bva13g01582 655 SMART arm_5 482 517 IPR000225 GO:0005515
Bva13g01582 655 SMART arm_5 177 218 IPR000225 GO:0005515
Bva13g01582 655 SMART arm_5 219 259 IPR000225 GO:0005515
Bva13g01582 655 SMART arm_5 560 600 IPR000225 GO:0005515
Bva13g01582 655 Gene3D - 150 314 IPR011989 -
Bva13g01582 655 SUPERFAMILY ARM repeat 160 612 IPR016024 -
Bva13g01582 655 MobiDBLite consensus disorder prediction 347 387 - -
Bva13g01582 655 PANTHER ARMADILLO REPEAT ONLY 4 1 655 - -
Bva13g01582 655 Gene3D - 3 121 IPR036537 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01582 Bva-Chr13 9447987 9450402 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01582 - - gmx:100807066 1000.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01582 13 9447987 9450402 Bva13g01582 13 9447987 9450402 ECH