Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01578 atggaaacgGACAAGGCGGTGGAAACAGTGATAGTTGGAAACTATGTGGAAATGGAAACAGAAGGGAAACCTAAGGGCATCAAGAACACTTTGTCAAAGTTCTTGTGGCATGGTGGCTCTGTTTATGATGCTTGGTTTAGCTGTGCTTCCAACCAGGTGGCACAAGTCTTGCTTACGTTGCCATATTCATTTTCCCAACTGGGAATGCTTTCGGGCATTCTTCTTCAACTCTTCTATGGCTTGTTGGGTAGCTGGACAGCTTACCTTATTAGCATACTCTATGTTGAATACAGAaccagaaaagagagagaaaaagttgATTTCAGAAACCATGTCATCCAGTGGTTCGAGGTTCTTGATGGGCTCCTCGGGAAGCACTGGAGAAACGTGGGTTTGGCTTTTAACTGTACTTTCCTTCTGTTTGGATCTGTCATCCAACTCATAGCTTGTGCAAGCAACATATATTACATAAACGACAATCTGGACAAAAGGACTTGGACTTACATCTTCGGAGCTTGCTGTGCCACCACCGTCTTTATTCCTTCCTTTCACAACTACAGAATCTGGTCCTTTCTGGGCCTCCTCATGACCACTTACACCGCTTGGTACCTCACCGTTGCCTCTCTCCTCCACGGCCAgGTAGAGGGAGTTAAGCATTCGGGTCCCACCAAATTGGTTCTATATTTCACAGGGGCCACAAACATTCTTTATACATTCGGCGGACACGCTGTCACTGTGGAGATAATGCACGCAATGTGGAAGCCGCAGAAATTCAAGGCCatatacttgctggctacactcTATGTCCTGACACTGACCCTTCCATCGGCAGCAGCAGTATACTGGGCTTTCGGGGACATGCTTCTAGATCACTCCAAcgctttctctctcctcccaAGATCTCCCCCCCGAGACATGGCTGTTATTTTAATGCTCATCCACCAGtTTATTACATTTGGGTTTGCATGCACACCATTGTACTTCGTATGGGAGAAAGCAATAGGGATGCACGAATGCAAGAGCCTGTGCAAGCGTGCGGCGGCGAGATTGCCTGTGGTCATACCCATATGGTTCTTGGCCATCATATTCCCCTTCTTTGGTCCCATCAACTCCACCGTTGGATCTCTTCTCGTCAGCTTCACTGTTTACATCATCCCCGCCCTGGCCCACATCTTCACCTACAAATCTGCAGCTGCTCGAGAGAATGCAGTAGAGCAACCGCCCAAGTTTATGGGAGGTTGGGTTGGGTCCTACACGATCAACGTATTCGTGGTGGTGTGGGTCCTAGTTGTTGGGTTTGGATTCGGTGGGTGGGCGAGCATGGTAAACTTCGTACACCAGATTGATACATTCGGTTTATTCACCAAGTGTTACCAGTGCCCCCCGCCGCCACGGCCACTCAACTCCACCGCACCGGCGCCGCCGCCTCTCCAGCACCCCCACTTCAACCACTCTTCACACCCCCATTG 1469 0.4697 METDKAVETVIVGNYVEMETEGKPKGIKNTLSKFLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILLQLFYGLLGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTVASLLHGQVEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVLTLTLPSAAAVYWAFGDMLLDHSNAFSLLPRSPPRDMAVILMLIHQFITFGFACTPLYFVWEKAIGMHECKSLCKRAAARLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHIFTYKSAAARENAVEQPPKFMGGWVGSYTINVFVVVWVLVVGFGFGGWASMVNFVHQIDTFGLFTKCYQCPPPPRPLNSTAPAPPPLQHPHFNHSSHPH 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01578 489 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 2 3 469 - -
Bva13g01578 489 MobiDBLite consensus disorder prediction 468 489 - -
Bva13g01578 489 Pfam Transmembrane amino acid transporter protein 37 430 IPR013057 -
Bva13g01578 489 PANTHER OS05G0424000 PROTEIN-RELATED 3 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01578 Bva-Chr13 9420465 9425627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01578 4 485 Organic Solute Cotransporters AT2G21050 86.515 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01578 K13946 - pvy:116122887 915.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01578 13 9420465 9425627 Bva13g01578 13 9420465 9425627 ECH