Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01413 ATGGAAAAGCTCAAGCCAAGCACAGCAAACTCTCCTCCTCTCACCCCTTTGGGCTTCTTAGATAGAGCAGCTACTGTCTATGGCGATTGCAATTCCGTTATTTACAATAATACCACTTACACTTGGTCTCAAACCCACCGTCGATGCCTCCAGCTGGCTTCTTCCCTTGTGTCCGTCGGCATCCGCCGTGGCCATGTTGTCTCCGTCGTGGCTCCCAACGTCCCCGCCATGTACGAACTCCACTTTGCAGTCCCCTTCGCCGGTGCCATACTCAACTGCATCAACACCCGCCTTGACGCGCGGACCATCTCCGTTATTCTCCGGCATGGCGAGTCGAAGCTGGTCTTCGTCGACTGCGCCTCACGCGCTCTTGTTCTCGAAGCCTTATTCTTGTTGCCACAAAACAGTCAACGCCCAGTCCTCGTCCTCATCGCAGATGATACTATCGAGCCTTTGTCGTCATCACTCACCGTTGATTTTCTTGACACTTACGAAGGGATGGTGGAGAAAGGCGACCCTGGGTTCCGGTGGATCCGGCCTAACACAGAGTGGGACCCTATGACACTGAATTTCACCTCTGGTACAACGTCGTCTCCGAAAGGGGTTGTTCATTCTCATCGAGGGACTTTCACTATAACTGTAGATTCTCTGGTTGACTGGGCAGTGCCTAAACAGCCTATTTACCTGTGGACCCTACCCATGTTCCACGCTAATGGGTGGAGCTACCCGTGGGGTATCGCTGCCGTCGGCGGTACCAATGTTTGTGTCCGTAGATTTGATGCCGAGGTCGTGTTTGGTTTGATCGAGCGCCATGGCGTCACTCACATGTGTGGTGCACCTGTGGTGCTCAATATGCTGACAAACTCCCCTAAAAACAAACTGCTCCGAAACCCCGTTTATCTTCTCACAGCCGGAGCACCACCCCCGGCGGCAGTTCTGCTCCGAACCGAAGCATTGGGCTTTGTTGTGGGTCATGGGTACGGGCTAACGGAAACGGGTGGGATAATGGTGTCCTGTGCTTGGAAACCCCAGTGGAACCGGTTGCCGGCGACGGAGAAAGCTCGACTGAAGGCGAGGCAAGGGGTAAGGACAATTGGAATGGCGGAGATGGACGTGGTGGATTCCGAGTCAGGACTCAGCGTGAGACGAGATGGGTCAACGTTGGGTGAAGTGGTTCTTCGGGGCGGGTGTGTAATGCTGGGATATTTAAAAGACCCGGAAGCAACATCCAAATGCTTCAGAAACGGGTGGTTCTACACGGGCGACGTGGGGGTGATGCACCCAGATGGGTACTTGGAAATTAAGGACCGATCAAAGGACGTGATCATTAGCGGTGGAGAGAATCTCAGCAGCGTGGAGGTGGAATCAATTTTATACACCCACCTGGCGATAAACGAAGCTGCAGTGGTGGCCCGACCCGACGATTACTGGGGCGAGACGCCATGTGCATTTGTGAGCTTGAAGAATGGGTTGGAGAAGAAACCCACAGAGAAGGAAATCATTGAATATTGCCGGAGAAACATGCCGCACTATATGGTGCCCAAAACGGTGGTGTTTAGGGAGGAACTTCCGAAGACTTCAACGGGGAAGATCCAGAAGTTTGTACTGAGAAATATTGCTAAAGATATGGGACCCATGCAGAATAACCAGAGCCGTTTGTA 1661 0.5292 MEKLKPSTANSPPLTPLGFLDRAATVYGDCNSVIYNNTTYTWSQTHRRCLQLASSLVSVGIRRGHVVSVVAPNVPAMYELHFAVPFAGAILNCINTRLDARTISVILRHGESKLVFVDCASRALVLEALFLLPQNSQRPVLVLIADDTIEPLSSSLTVDFLDTYEGMVEKGDPGFRWIRPNTEWDPMTLNFTSGTTSSPKGVVHSHRGTFTITVDSLVDWAVPKQPIYLWTLPMFHANGWSYPWGIAAVGGTNVCVRRFDAEVVFGLIERHGVTHMCGAPVVLNMLTNSPKNKLLRNPVYLLTAGAPPPAAVLLRTEALGFVVGHGYGLTETGGIMVSCAWKPQWNRLPATEKARLKARQGVRTIGMAEMDVVDSESGLSVRRDGSTLGEVVLRGGCVMLGYLKDPEATSKCFRNGWFYTGDVGVMHPDGYLEIKDRSKDVIISGGENLSSVEVESILYTHLAINEAAVVARPDDYWGETPCAFVSLKNGLEKKPTEKEIIEYCRRNMPHYMVPKTVVFREELPKTSTGKIQKFVLRNIAKDMGPMQNNQSRL 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01413 553 CDD ttLC_FACS_AEE21_like 12 538 - -
Bva13g01413 553 PANTHER LONG-CHAIN ACYL-COA SYNTHETASE 2 546 - -
Bva13g01413 553 PANTHER ACYL-ACTIVATING ENZYME 2 546 - -
Bva13g01413 553 Pfam AMP-binding enzyme 21 444 IPR000873 -
Bva13g01413 553 ProSitePatterns Putative AMP-binding domain signature. 189 200 IPR020845 -
Bva13g01413 553 SUPERFAMILY Acetyl-CoA synthetase-like 10 542 - -
Bva13g01413 553 Gene3D - 440 543 IPR045851 -
Bva13g01413 553 Gene3D - 2 439 IPR042099 -
Bva13g01413 553 Pfam AMP-binding enzyme C-terminal domain 453 530 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01413 Bva-Chr13 7420110 7422631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01413 1 543 EF-hand Containing Proteins AT1G21540 64.919 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01413 - - gmx:100779857 897.116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01413 13 7420110 7422631 Bva13g01413 13 7420110 7422631 ECH