Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01373 ATGGGATTCGAGAAGATCAAGGTCGCCAACCCCATCGTTGAGATGGACGGAGATGAAATGACACGAGTTATCTGGAAATCAATAAAGGATAAGCTCATTTTTCCCTTTGTGGAGTTGGACATCAAGTATTTTGACCTAGGCCTTCCTCACCGTGATGCTACTGATGATAAAGTAACTGTTGAAAGTGCAGAAGCTACTTTGAAGTATAATGTAGCAATCAAATGTGCAACTATAACTCCAGATGAAGCTCGTGTCAAGGAGTTTGACCTGAAGCACATGTGGAAGAGTCCAAATGGGACAATTAGAAACATTTTGAATGGGACTGTCTTCAGAGAACcaattatttgcaaaaatgTCCCTCGCCTTGTTCCAgGCTGGACAAAACCTATTTGTATTGGAAGGCATGCTTTTGGGGACCAATATCGGGCAACTGACACAGTCATTAAAGGAGCTGGAAAACTGAAACTGGTGTTTGTACCAGAAGGGAAAGATGAGGCAACTGAATTGGAGGTTTATAACTTCACAGGCGCTGGCGGTGTTGCATTGTCCATGTATAACACTGATGAGTCAATCCGAGCTTTTGGTGAGGCTTCAATGACAACTGCGTATGAGAAAAAATGGCCTCTCTATCTTAGCACCAAAAATACAATCCTTAAGAAGTATGATGGAAGATTCAAGGACATATTCCAAGAAGTTTATGAGGCTAACTGGAAATCAAAGTTTGAGGCTGCTGGTATATGGTATGAGCACCGGCTCATTGATGATATGGTGGCTTATGCTGTCAAGAGTGAAGGAGGCTATGTCTGGGCATGCAAAAACTATGACGGAGATGTCCAGAGTGATTTCTTAGCCCAAGGCTTTGGATCTCTGGGTTTGATGACTTCTGTACTGGTTTGCCCTGATGGTAAGACCATAGAAGCAGAAGCTGCCCATGGTACAGTCACAAGACATTTCAGGGTTCATCAAAAGGGAGGGGAAACCAGCACAAATAGCATTGCATCCATCTTTGCTTGGACAAGAGGGCTAGCCCACAGAGCAAAGTTGGATAACAATGATAAGCTATTGGATTTCACCGAAAAACTCGAGAAAGCTTGTATTGGAACAGTAGAATCTGGGAAGATGACCAAGGATTTGGCACTTATTCTTCATGGATCCAAGCTTTCTAGGGAACACTATCTGAACACAGAGGAGTTCATTGATGCTGTTGCAGCTGATCTTAAAGCAAGCCTTGAAGCTTG 1238 0.4265 MGFEKIKVANPIVEMDGDEMTRVIWKSIKDKLIFPFVELDIKYFDLGLPHRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFDLKHMWKSPNGTIRNILNGTVFREPIICKNVPRLVPGWTKPICIGRHAFGDQYRATDTVIKGAGKLKLVFVPEGKDEATELEVYNFTGAGGVALSMYNTDESIRAFGEASMTTAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRLIDDMVAYAVKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDNNDKLLDFTEKLEKACIGTVESGKMTKDLALILHGSKLSREHYLNTEEFIDAVAADLKASLEA 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01373 412 ProSitePatterns Isocitrate and isopropylmalate dehydrogenases signature. 273 292 IPR019818 GO:0000287|GO:0016616|GO:0051287
Bva13g01373 412 PANTHER NADP-SPECIFIC ISOCITRATE DEHYDROGENASE 1 410 IPR004790 GO:0004450|GO:0006102
Bva13g01373 412 TIGRFAM nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 5 411 IPR004790 GO:0004450|GO:0006102
Bva13g01373 412 PANTHER ISOCITRATE DEHYDROGENASE [NADP] 1 410 - -
Bva13g01373 412 PIRSF IDH_NADP 1 412 IPR004790 GO:0004450|GO:0006102
Bva13g01373 412 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 3 409 - -
Bva13g01373 412 Pfam Isocitrate/isopropylmalate dehydrogenase 7 402 IPR024084 -
Bva13g01373 412 SMART Iso_dh_2 11 402 IPR024084 -
Bva13g01373 412 Gene3D Isopropylmalate Dehydrogenase 4 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01373 Bva-Chr13 7172333 7177700 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01373 K00031 - cit:102609279 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01373 13 7172333 7177700 Bva13g01373 13 7172333 7177700 ECH