Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00988 ATGGAGCTATCCAAAGTGTTAGCCATTCTCATCTTTATTTCAAGCTTGGCCTTTCTCTTTCAGGTCTCCCATGGTCAGGATTCCAAGGAAGACTTTCTGAGAGCCCACAATGCTGCTCGAGCACAGGTTGGTGTTCCACCCATGAAATGGGACGACCAGGTTGCCGCTTTTGCCCAAAACTACGCCAACCAGCGCAGAGGAGACTGCAAACTCGTGCACTCCGGCGGCGGCGGGCGTTATGCCGAGAATCTAGCATGGGGCTCCGGCAACCTGAGTGGCACGGCGGCTGCGAAAATGTGGGTGGATGAAAAAGCCTACTATAGCTACAATTCCAACACTTGTGCTGGGGGACATCAGTGTGGGCACGATACTCAAGTGGTTTGGCGCAGATCGGTTCGCCTAGGGTGTGCTAAATTTAGGTGCAACAATGGTGGCACGTTCATCACTTGCAACTATGATCCTCCGGGCAACTACGTTGGACAAAAACCTTATTG 494 0.5223 MELSKVLAILIFISSLAFLFQVSHGQDSKEDFLRAHNAARAQVGVPPMKWDDQVAAFAQNYANQRRGDCKLVHSGGGGRYAENLAWGSGNLSGTAAAKMWVDEKAYYSYNSNTCAGGHQCGHDTQVVWRRSVRLGCAKFRCNNGGTFITCNYDPPGNYVGQKPY 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00988 164 ProSitePatterns CRISP family signature 2. 147 158 IPR018244 GO:0005576
Bva13g00988 164 Gene3D CAP 26 164 IPR035940 -
Bva13g00988 164 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 20 164 IPR001283 -
Bva13g00988 164 PANTHER PATHOGENESIS-RELATED PROTEIN 1 20 164 - -
Bva13g00988 164 SMART SCP_3 27 160 IPR014044 -
Bva13g00988 164 Pfam Cysteine-rich secretory protein family 33 152 IPR014044 -
Bva13g00988 164 CDD CAP_PR-1 30 164 - -
Bva13g00988 164 PRINTS Allergen V5/Tpx-1 family signature 147 160 IPR001283 -
Bva13g00988 164 PRINTS Allergen V5/Tpx-1 family signature 48 66 IPR001283 -
Bva13g00988 164 PRINTS Allergen V5/Tpx-1 family signature 120 136 IPR001283 -
Bva13g00988 164 PRINTS Allergen V5/Tpx-1 family signature 96 109 IPR001283 -
Bva13g00988 164 SUPERFAMILY PR-1-like 20 164 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00988 Bva-Chr13 4747618 4748112 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00988 K13449 - qsu:112017588 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00988 13 4747618 4748112 Bva14g01163 14 5663745 5664362 BWGD
Bva13g00988 13 4747618 4748112 Bva13g00988 13 4747618 4748112 ECH