Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00987 ATGTCATTTCCCAAGGTTTCAATCTCTGTTCTCTGCTTCCTTGCCCTAGCCATCATGGCTCATGTCTCTCATGGCCAAGACACACAAGCAGACTACGTGAACGCCCACAATGCCGCGAGGTCACAGGTGGGCGTTCCACCTCTGGCTTGGGACAATGACGTCGCCGCTTTCGCGGAAAGCTACGCGAGCCAGCGCAAGGGAGACTGCCAGCTTATACACTCCGGTGGTGATGGCAAATATGGTGAGAACCTGGCATGGAGTTCTGCTGACCTTAGTGGTACGGATGCTGTGAAGATGTGGGTGGATGAGAAAGCTGACTATGACTACAGTTCTAACTCTTGTGCCAGTGGGAAGCAGTGTGGGCACTATACTCAGGTGGTTTGGCGAGATTCGGTTCGGCTTGGTTGTGCCAAGGTGACGTGTGACAATGGAGGCACCTTCATTGGGTGCAACTATGCTCCCCCTGGCAACTATATTGGACAAAAGCCTTACTA 494 0.5283 MSFPKVSISVLCFLALAIMAHVSHGQDTQADYVNAHNAARSQVGVPPLAWDNDVAAFAESYASQRKGDCQLIHSGGDGKYGENLAWSSADLSGTDAVKMWVDEKADYDYSSNSCASGKQCGHYTQVVWRDSVRLGCAKVTCDNGGTFIGCNYAPPGNYIGQKPY 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00987 164 ProSitePatterns CRISP family signature 2. 147 158 IPR018244 GO:0005576
Bva13g00987 164 ProSitePatterns CRISP family signature 1. 121 131 IPR018244 GO:0005576
Bva13g00987 164 CDD CAP_PR-1 29 164 - -
Bva13g00987 164 Gene3D CAP 26 164 IPR035940 -
Bva13g00987 164 SUPERFAMILY PR-1-like 11 164 IPR035940 -
Bva13g00987 164 Pfam Cysteine-rich secretory protein family 33 152 IPR014044 -
Bva13g00987 164 PRINTS Allergen V5/Tpx-1 family signature 48 66 IPR001283 -
Bva13g00987 164 PRINTS Allergen V5/Tpx-1 family signature 120 136 IPR001283 -
Bva13g00987 164 PRINTS Allergen V5/Tpx-1 family signature 147 160 IPR001283 -
Bva13g00987 164 PRINTS Allergen V5/Tpx-1 family signature 96 109 IPR001283 -
Bva13g00987 164 PRINTS Venom allergen 5 signature 94 109 IPR002413 -
Bva13g00987 164 PRINTS Venom allergen 5 signature 119 138 IPR002413 -
Bva13g00987 164 PRINTS Venom allergen 5 signature 48 66 IPR002413 -
Bva13g00987 164 SMART SCP_3 27 160 IPR014044 -
Bva13g00987 164 PANTHER PATHOGENESIS-RELATED PROTEIN 1B-LIKE 4 164 - -
Bva13g00987 164 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 4 164 IPR001283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00987 Bva-Chr13 4745232 4745877 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00987 K13449 - pvy:116145336 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00987 13 4745232 4745877 Bva14g01161 14 5656818 5657434 BWGD
Bva13g00987 13 4745232 4745877 Bva13g00987 13 4745232 4745877 ECH