Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00982 ATGGCGGTGGAGTATACTTGCTGTGAATCGCAGttttttatacacataatgataattaCGCTGCTAGTGTTGTTTGCTGGATTGATGTCTGGGCTCACTTTAGGGCTTATGTCCTTGAGTCTTGTTGATCTCGAAGTTTTGGCTAAGTCTGGTACTCCCCAGGATCGCAAACATGCTGAGAAAATATTGCCTGTTGTCAGAAATCAACATTTATTACTTTGCACCCTGCTAATTTGTAATGCTGCAGCCATGGAGgCACTTCCAATTTTTCTTGACTCTCTGATTACTGCTTGGGGAGCTATTCTGATTTCAGTGACATTAATTCTTCTGTTTGGTGAGATTATACCCCAATCAATCTGTTCTCGATATGGTTTGGCAATTGGTGCAACAGTGGCTCCAGTTGTCCGTGTGCTTGTATGGGTCTGCTTTCCTGTTGCATTTCCGATCAGCAAGCTGCTGGACTTTTTGCTGGGCCATCGGCATGAAGCCCTTTTTCGAAGAGCTGAGTTGAAAACCCTTGTAAATCTGCATGGCAACGAGGCTGGAAAAGGTGGGGAACTGACACATGATGAAACAACAATCATTGCTGGGGCTCTTGAACTCACTGAGAAAAAAGCCAGTGATGCCATGACTCCTATTTCTGAAGTCTTCTCAATCGATATCAATTCGAGGCTTGATAGGGAATTGATGAATCTAGTATTGGAGAAAGGGCATAGTAGAATCCCAGTTTACTATGAGCAACCTACAAACATTATTGGACTTATCCTGgtcaaaaatttattgaccATTCACCCAGAAGATGAAGTACCTGTGAAGAATGTAACTATTCGCAGGATTCCAAGGGTTCCAGAAACAATGCCACTTTATGACATTTTGAACGAGTTCCAGAAGGGACACAGCCACATGGCTATAGTTGTAAAACAGCGCAACAAGATAGAGCAGCAATATTCTAACAATAATGTCAATGATTCTGTGAAAGATGTGAGGGTGGATATTGATGGTGAAAAGCCTTCCCAAGAAAAACCTGTGAGACACAAGGTGCCAATTCAAAGGTGGAAGAGCTTTCCAAATACCAATCAATCTGGAAGGGGTTCTCGGAGCAGAAAATGGACAAAAGAGATGTACTCAGATATTTTGCAGATAGATGGAAATCCACTTCCAAAGCTCcccgaagaagaagaagctgttGGAATAATCACAATGGAAGATGTCATTGAAGAGCTTTTACAGGAGGAGATCTTCGATGAGACAGACCATCATTTTGAAGACTCATG 1274 0.4058 MAVEYTCCESQFFIHIMIITLLVLFAGLMSGLTLGLMSLSLVDLEVLAKSGTPQDRKHAEKILPVVRNQHLLLCTLLICNAAAMEALPIFLDSLITAWGAILISVTLILLFGEIIPQSICSRYGLAIGATVAPVVRVLVWVCFPVAFPISKLLDFLLGHRHEALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKKASDAMTPISEVFSIDINSRLDRELMNLVLEKGHSRIPVYYEQPTNIIGLILVKNLLTIHPEDEVPVKNVTIRRIPRVPETMPLYDILNEFQKGHSHMAIVVKQRNKIEQQYSNNNVNDSVKDVRVDIDGEKPSQEKPVRHKVPIQRWKSFPNTNQSGRGSRSRKWTKEMYSDILQIDGNPLPKLPEEEEAVGIITMEDVIEELLQEEIFDETDHHFEDS 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00982 424 SUPERFAMILY CBS-domain pair 194 410 IPR046342 -
Bva13g00982 424 Gene3D - 378 416 IPR046342 -
Bva13g00982 424 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Bva13g00982 424 ProSiteProfiles CBS domain profile. 210 271 IPR000644 -
Bva13g00982 424 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Bva13g00982 424 Pfam Cyclin M transmembrane N-terminal domain 18 190 IPR002550 -
Bva13g00982 424 Gene3D - 191 324 IPR046342 -
Bva13g00982 424 PANTHER AND COBALT EFFLUX PROTEIN CORC, PUTATIVE-RELATED 1 424 - -
Bva13g00982 424 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 424 IPR045095 GO:0010960
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00982 Bva-Chr13 4722022 4726325 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00982 K16302 - gmx:100801937 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00982 13 4722022 4726325 Bva14g01157 14 5624812 5629241 BWGD
Bva13g00982 13 4722022 4726325 Bva13g00982 13 4722022 4726325 ECH