Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00979 ATGTCGATAACCCAGAAACTGGCTACTTCaatctcttcttcctcttcctctttcttggcCCCCTCTAACTTCAGCTCAAGGAGACAGAATGTTTCACTGCCAACCAAAAGCGTGAGCATTCCTAAATGCGTGGCGACTCCTCAAGAAGCTCAAACTGcCTACAAGACAAGAGTCTCCCGCAATGAAAACATGGCTAAACTTCAAGCTGGTTATCTCTTTCCGGAGATTGCTAGAAGAAGGTCTGCCCACTTGCTTAAGTATCCTGATGCTAAAGTGATAAGCCTGGGAATTGGTGACACTACTGAACCCATTCCTGAAGTCATAACTTCTGCAATGGCAAAGAGAGCACATGCTTTATCCACCATTGAGGGTTACAGTGGTTATGGTGCTGAACAAGGTGAAAAGCCTGTGCGAAGTGCCATTGCTTCAACATTCTACAGTGACCTTGGCATAGAGAtagatgatatttttgtttcagatGGAGCAAAATGTGACATATCTCGCCTTCAGATGCTCTTTGGATCAAATGTAAAAATGGCTGTGCAAGATCCATCTTACCCGgcCTATGTAGACTCAAGTGTTATTATGGGTCAGACTGGTCCATACCTGAAGGATGTTGAGAAGTATGGAAACATTGAATATATGAGGTGTAATCCAGAAAATGGTTTCTTCCCCGATCTATCCACTATTTCTCGACCAGATATCGTATTTTTCTGCTCGCCCAACAATCCAACTGGTGCTGCAGCAACTAGGGAGCAACTGACACAATTAGTTCAGTATGCTAAGGACAACGGGTCTGTAATAGTCTATGATTCTGCATATGCAATTTATATTTCGGGCGACAACCCACGTTCCATCTTCGAAATTCCTGGTGCCAAAGAGGTTGCCATTGAGACATCATCATTTAGTAAGTATGCTGGTTTCACCGGTGTTCGACTGGGCTGGACTGTGGTTCCAAAGCGGCTGCTATTTTCAGGTGGGTTTCCTGTTGCCAAGGACTTCAACCGTATTGTATGCACTACTTTCAATGGTGCATCCAATATTTCTCAGGCTGGTGGTCTTGCTTGCCTTTCACCAGAGGGCCTTCAGGCTATGCAAGAGGTTGTTGGATTCTACAAAGAAAACACTAACATAATTGTTGGCACATTTGAGTCTCTTGGTTTTAAAGTATATGGAGGCAAAAATGCACCATATGTTTGGGTTCATTTCCCTGGCCGAAGCTCATGGGATGTATTCAGTGAGATTCTTGAGAAGACCCACGTAGTTACAACTCCTGGTAGTGGTTTCGGACCTGGTGGGGAAGGTTTCATCAGGGTTAGTGCCTTTGGTCACagggaaaatattttggagGCTTGCagaagattcaaggagctatACAGGTG 1382 0.419 MSITQKLATSISSSSSSFLAPSNFSSRRQNVSLPTKSVSIPKCVATPQEAQTAYKTRVSRNENMAKLQAGYLFPEIARRRSAHLLKYPDAKVISLGIGDTTEPIPEVITSAMAKRAHALSTIEGYSGYGAEQGEKPVRSAIASTFYSDLGIEIDDIFVSDGAKCDISRLQMLFGSNVKMAVQDPSYPAYVDSSVIMGQTGPYLKDVEKYGNIEYMRCNPENGFFPDLSTISRPDIVFFCSPNNPTGAAATREQLTQLVQYAKDNGSVIVYDSAYAIYISGDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVVPKRLLFSGGFPVAKDFNRIVCTTFNGASNISQAGGLACLSPEGLQAMQEVVGFYKENTNIIVGTFESLGFKVYGGKNAPYVWVHFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRENILEACRRFKELYR 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00979 460 Gene3D - 102 359 IPR015421 GO:0003824
Bva13g00979 460 CDD AAT_like 93 457 - -
Bva13g00979 460 Gene3D Aspartate Aminotransferase, domain 1 72 456 IPR015422 GO:0003824
Bva13g00979 460 Pfam Aminotransferase class I and II 91 455 IPR004839 GO:0009058|GO:0030170
Bva13g00979 460 TIGRFAM DAPAT_plant: LL-diaminopimelate aminotransferase 59 457 IPR019942 GO:0008483
Bva13g00979 460 PANTHER LL-DIAMINOPIMELATE AMINOTRANSFERASE, CHLOROPLASTIC 9 459 - -
Bva13g00979 460 Hamap LL-diaminopimelate aminotransferase [dapL]. 59 458 IPR019942 GO:0008483
Bva13g00979 460 PANTHER AMINOTRANSFERASE 9 459 IPR019942 GO:0008483
Bva13g00979 460 SUPERFAMILY PLP-dependent transferases 71 455 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00979 Bva-Chr13 4709380 4714224 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00979 K10206 - gmx:100801405 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00979 13 4709380 4714224 Bva13g00979 13 4709380 4714224 ECH