Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00978 ATGGAGGACCACACATATGTTGTTGGGCAAGAATTTCCTGATGTAAAAGCTTTCCGAAATGCAATTAAAGAAGCTGCTATCGCACAGCATTTCGAGCTTCGTATTATTAAAAGTGATTTGGTTCGTTACTTTGCTAAGTGTGCCTCAGAGGGATGTCCATGGCGTATTCGTGCTGTCAAGGTCCCTAATGCACCAACTTTTACAATAAGAAGTCTTGAAGAGACGCATACTTGTGGGAGAAACGCACATAACGGGCACCACCAGGCTTCTGTTGATTGGATTATAAAGAAAAGCAATCCCGGGAGTATAGCAGAGGTGTTTACCACTGGTGCAGATAACCGTTTCCAGAGgctttttgtttccttctaTGCATCAATTTACGGTTTCCTCAATGGTTGTTTGCTCATAGTTGGAGTTGGTGGAATCCAGCTGAAAAGCAAATACCTTGGCACATTGCTTTCATCAACTTCGGTTGATGCTGACGGTGGGCTGTTTCCGCTTGCATTTGGTGTTGTTGAtgcagaaaatgaagagagctGGACATGGTTTATGTCTGAGTTGCACAAGGCACTAGAGATGAATACTGAAAACATACCACCAATTATAGTTTTCTCAGATGGACAAAAGGGTATCATGGATGCTGTAAGAAGGAAGTTCCCAAATTCTTCTCATGCATACTGCATGCGCCACTTAAGCGAAAGCATTGGCAAAGAGTTCAAGAATTCTAGGCTTGTCCATCTTCTGTGGAAGGCAGCATATGCCACTACAACCGTtgctttcaaagaaaaaatggctGAAATAGAGGAAGTCTCTCCTGAAGCTGCTAAATGGTTACAGCAATTCCATCCTTCCAACTGGGCTCTAGTATACTTTGATGGAACACGGTACGGTCATCTGTCCTCAAATGTTGAGGAGTTCAATAAATGGATTCTTGAAGCTCGGGAGTTGCCGATTATCCAGGTGATCGATTGGATTCATAGGGAACTTCAGACTGAGTTTAAGGAGAGGCGCTCAAGGAGCAGTTCATGGCTCTCTGTACTTGCTCCATCTGCTGAGAAGCGAATGATGGAAGCTATCAACCGGGCATCCTCGTATCAAGTCCTCAGATCAGATGAAGTAAAATTTGAGGTTCTTTCAGCTGAACGCTCCGACATTGTAAATATTGGTAGCCGCAGCTGTTCTTGCCGTGATTGGCAGCTGCACGGAATACCATGCTCCCACGCTGTTGCAGCTCTTATCTCATGTCGCAAGGATGTGTATGCATTCACCGAGAAGTGTTTTACCGTTAACTGTTACAGGGAGACCTATGCAGAGGAAATACACCCTATCCCTGGAAAACTTGAATGGAGGAAAACAGATGAGGCAGCCATGGATGAAGATGTCCAAGCTGTCCGGCCACCCAAATTCCGGAGACCCCCTGGACGGCCGGAAAAGAAACGGATTTGTGTGGAGGACCTTAATCACGAGAAACACACGGTGCATTGCAGTCGATGTAACCAAACTGGCCATTACAAGACAACTTGCAAAGCGGAGATCATTGGTACTATAGAACAGTTCTA 1559 0.4362 MEDHTYVVGQEFPDVKAFRNAIKEAAIAQHFELRIIKSDLVRYFAKCASEGCPWRIRAVKVPNAPTFTIRSLEETHTCGRNAHNGHHQASVDWIIKKSNPGSIAEVFTTGADNRFQRLFVSFYASIYGFLNGCLLIVGVGGIQLKSKYLGTLLSSTSVDADGGLFPLAFGVVDAENEESWTWFMSELHKALEMNTENIPPIIVFSDGQKGIMDAVRRKFPNSSHAYCMRHLSESIGKEFKNSRLVHLLWKAAYATTTVAFKEKMAEIEEVSPEAAKWLQQFHPSNWALVYFDGTRYGHLSSNVEEFNKWILEARELPIIQVIDWIHRELQTEFKERRSRSSSWLSVLAPSAEKRMMEAINRASSYQVLRSDEVKFEVLSAERSDIVNIGSRSCSCRDWQLHGIPCSHAVAALISCRKDVYAFTEKCFTVNCYRETYAEEIHPIPGKLEWRKTDEAAMDEDVQAVRPPKFRRPPGRPEKKRICVEDLNHEKHTVHCSRCNQTGHYKTTCKAEIIGTIEQF 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00978 519 Pfam MuDR family transposase 4 69 IPR004332 -
Bva13g00978 519 PANTHER OS01G0334000 PROTEIN 100 510 - -
Bva13g00978 519 PANTHER OS01G0334000 PROTEIN 1 95 - -
Bva13g00978 519 PANTHER POLYPROTEIN, PUTATIVE-RELATED 1 95 - -
Bva13g00978 519 ProSiteProfiles Zinc finger SWIM-type profile. 375 416 IPR007527 GO:0008270
Bva13g00978 519 SMART 26again6 391 418 IPR006564 GO:0008270
Bva13g00978 519 Pfam SWIM zinc finger 382 415 IPR007527 GO:0008270
Bva13g00978 519 Pfam MULE transposase domain 145 232 IPR018289 -
Bva13g00978 519 PANTHER POLYPROTEIN, PUTATIVE-RELATED 100 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00978 Bva-Chr13 4707084 4708994 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00978 - - zju:107427481 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00978 13 4707084 4708994 Bva13g00978 13 4707084 4708994 ECH