Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00953 ATGGCCACCACAACCACCGTCACCACCCCCAAGGGTGACCCAGAAAGGCCAAACGGCGCTGAAGTGGATGAAGAAGATGACCTCTCTCCCATTGAGGAGGTCCGGTTGACGGTTGCCAACACCGACGACCCGACCCTACCCGTGTGGACCTTCCGGATGTGGTTCTTGGGTCTTCTCTCGTGCGCCCTTTTGTCATTCCTCAACCAATTCTTTGCTTACCGAACTGAACCACTCATTATAACCCAAATCACCGTTCAGGTCGCCGTCCTCCCCATAGGCCATTTCATGGCGGCGGTGCTCCCTACCACCAAGTTCCGGGTGCCCGGATTTGGTTCCAAGGAGTTCTCCTTCAATCCGGGTCCCTTTAACATGAAGGAGCACGTGCTTATTACCATATTTGCCAATGCCGGAAGCGCATTTGGATCCGGGTCACCTTATGCGGTCGGAATTGTTAACATAATCAAAGCGTTCTATGGCCGGAGCATCTCGTTTTTGGCTGCCTGGCTTCTTATCATTACCACTCAgGTGTTGGGCTATGGATGGGCTGGATTGCTAAGGAAGTATGTGGTGGAGCCGGGTCACATGTGGTGGCCAAGCACCCTCGTCCAGGTTTCACTTTTCCGAGCATTGCACGAAAAAGATAACGATGATCACCGACTGTCAAGGgcaaagtttttctttattgcatTAGTTTGCAGTTTTTCATGGTATGTGATTCCTGGATACTTGTTCTCAACACTCTCAACCATATCATGGGTTTGCTGGATATTCTCCAAGTCAGTCACAGCTCAGCAGATAGGCTCAGGCATGCGTGGCCTAGGACTTGGGTCATTCACACTTGACTGGACTGTTGTGGCCTCGTTCTTGTTCAGTCCTCTCATCTCACCATTCTTCGCCATTGCCAATGTTTTTGTGGGCTATGCATTGATCGTCTGGGTTGTGATTCCTATAGCATACTGGGGATTTAACGTGTATGGTGCGAACAGATTTCCCATTTTCTCCTCACACTTGTTCACTAACCAGGGTCAAATATACAACATATCAGCTATTGTCAATAATCAGTTTGAGATAAATCTTGAAGACTATCAGAAGCAAGGCAGAATTCATCTGAGTGTGTTTTTTGCTCTCACTTATGGCTTTGGATTTGCCACCATAGCATCCACCATTACACATGTTGCTTGTTTCTATGGAAGGGAGATTATGGAGCGTTATCGTGCTTCTTCCCAGCGCAAAGAGGATATCCACACAAAACTGATGAAAAAATACGAGGACATACCTTCTTGGTGGTTTTACCTGTTGCTTGTTCTGTCATTTGTAGTTTCCCTAGTACTCtgcatttttctaaataatcaAGTTCAAATGCCTTGGTGGGGACTCCTCTTTGCAGCAGCATTGGCCTTTGGTTTTACCCTTCCAATCAGCATCATTACCGCCACCACAAACCAGACACCGGGGTTGAACATTATCACAGAGTATGTCTTTGGTCTCATTTACCCTGGAAGACCAATAGCCAATGTATGTTTCAAGACCTACGGTTACATAAGCATGGCTCAAGCTGTCTCCTTCCTCAGTGATTTCAAGCTTGGACACTACATGAAGATCCCTCCAAGATCAATGTTCTTGGTTCAGTTCATAGGTACAATGCTTGCCGGAACCATAAACATTGGTGTGGCGTGGTGGTTGCTGAACTCCGTCAAGAACATTTGCCATGATGAACTCCTTCCTGAAGGAAGTCCATGGACATGCCCCGGCGACCGTGTTTTCTTTGATGCCTCAGTGATTTGGGGCTTGGTAGGACCCAAGCGGATCTTTGGTTCTCTAGGAAACTACAGTGCAATGAATTGGTTCTTCCTTGCTGGTGGACTAGGACCTGTACTTGTTTGGCTATTGCACAAGGCATTTCCCAAACAATCATGGATTCCCCTTATTAATCTTCCCGTGCTTCTGGGAGCAACAGGAATGATGCCACCAGCAACAGCATTGAACTACAATGCCTGGGTTATAGTCGGAACAATCTTCAACTTCTTCGTCTTCCGTTACAGAAAGCAATGGTGGCAGAGATACAACTATGTTCTCTCAGCAGCGCTTGATGCCGGCGTTGCTTTCATGGCTGTCTTGCTTTACTTCTCGCTTGGCCTGGAAAACAAAAGCCTCGACTGGTGGGGAACACAAGGTGAGCATTGTCCTCTGGCAAAATGCCCAACAGCAAAAGGCATAGCTGTTGATGGTTGCCCAGTTCGGCGATG 2246 0.4702 MATTTTVTTPKGDPERPNGAEVDEEDDLSPIEEVRLTVANTDDPTLPVWTFRMWFLGLLSCALLSFLNQFFAYRTEPLIITQITVQVAVLPIGHFMAAVLPTTKFRVPGFGSKEFSFNPGPFNMKEHVLITIFANAGSAFGSGSPYAVGIVNIIKAFYGRSISFLAAWLLIITTQVLGYGWAGLLRKYVVEPGHMWWPSTLVQVSLFRALHEKDNDDHRLSRAKFFFIALVCSFSWYVIPGYLFSTLSTISWVCWIFSKSVTAQQIGSGMRGLGLGSFTLDWTVVASFLFSPLISPFFAIANVFVGYALIVWVVIPIAYWGFNVYGANRFPIFSSHLFTNQGQIYNISAIVNNQFEINLEDYQKQGRIHLSVFFALTYGFGFATIASTITHVACFYGREIMERYRASSQRKEDIHTKLMKKYEDIPSWWFYLLLVLSFVVSLVLCIFLNNQVQMPWWGLLFAAALAFGFTLPISIITATTNQTPGLNIITEYVFGLIYPGRPIANVCFKTYGYISMAQAVSFLSDFKLGHYMKIPPRSMFLVQFIGTMLAGTINIGVAWWLLNSVKNICHDELLPEGSPWTCPGDRVFFDASVIWGLVGPKRIFGSLGNYSAMNWFFLAGGLGPVLVWLLHKAFPKQSWIPLINLPVLLGATGMMPPATALNYNAWVIVGTIFNFFVFRYRKQWWQRYNYVLSAALDAGVAFMAVLLYFSLGLENKSLDWWGTQGEHCPLAKCPTAKGIAVDGCPVRR 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00953 748 MobiDBLite consensus disorder prediction 1 27 - -
Bva13g00953 748 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 28 715 IPR004648 GO:0055085
Bva13g00953 748 PANTHER ISP4 LIKE PROTEIN 23 746 IPR004648 GO:0055085
Bva13g00953 748 PANTHER OLIGOPEPTIDE TRANSPORTER 4 23 746 - -
Bva13g00953 748 Pfam OPT oligopeptide transporter protein 49 710 IPR004813 GO:0035673
Bva13g00953 748 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 32 713 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00953 Bva-Chr13 4565955 4571298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00953 20 747 Organic Solute Cotransporters AT5G64410 80.548 0.0 1248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00953 - - gmx:100811348 1315.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00953 13 4565955 4571298 Bva14g01121 14 5431832 5436439 BWGD
Bva14g01122 14 5439118 5443823 Bva13g00953 13 4565955 4571298 BWGD
Bva13g00953 13 4565955 4571298 Bva13g00953 13 4565955 4571298 ECH