Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00877 ATGGGTTCTGTTTCTGAGGGGAAGCCCCATGCTGTGCTGACTCCATATCCAGTTCAAGGCCATATAAACCCAATGATGAAACTAGCCAAATTGCTTCATACGAGAGGCTTTCACATAACCTTTGTACTTACCGATTTCAACCACAAACGCTTGCTCAAGTCAAGGGGCTCTAGTGCTCTTGATGGCTTGCCAGactttcaatttaaaacaatcCCAGATGGTCTTCCTCCCATGGATGCTGATGTTACTCAAGATATCCCCTCCCTTTGTGactcaacccaaaaaaattgcCTCATCCCTTATTGCAACCTTCTCACTAGACTGAATGAGTCTGCTTCTGTTGGCCTCATCCCCCGTGTTAATTGTTTAGTGTCTGATGTGAGCATGAGTTTCACTATTGATGCTGCAGAACAATTTGGAGTTCCTATTGTACTCCTTTGGCCATCAAGTGCAGCTTCATGCTTGGGTGCTGCTCACTATCACAGTCTAGTTGAAAAAGGTCTTCTTCCACTCAAAGATGAGAGTTATTTTACAAATGGGTACTTGGATACTGTAATAGACTGCATTCCAGGTATGAAAGATATCAGACTAAAGGACCTCGCGAGCTTTTTAATAACGACGGATCCAAATGATTTGATGTTGGACTTTGTCGTTGGAGTAATGGATAGAGCTCACAGAGCATCTGCCATTGTTTTTAACACATTTGATGGATTTGAGAGTGAAGAAGTGAATGCTCTCTCCTCTGTATacccctctctttctcttcacgCCATTGGCCcttttccttcatttcttAATCAGGCTCCAGAGAACCAGTTGGTATCCATAGGTTCCAATCTTTGGAAAGAGGAGACTGAGTGTCTTGAATGGCTTGAAACCAAAAAGCCTGGATCTGTGGTTTATGTGAACTTTGGCAGCATCACTACTATGTCTCGTGAGCAACTTTTTGAGCTTGCTTGGGGATTGGCTAACAGTAAGAAACCCTTTTTATGGATCATTAGGCCTGACCTTGTTAATGGCGGTTCGGTGATTTTGTCATCTGAATTTGTGAATGAAACTAAAGACGGAGGCTTCATAGCAAGCTGGTGCCCACAAGAGCAAGTGTTGAACCACCAGTCAATTGGAGGGTTCTTGACTCATTGTGGATGGAACTCAATGACAGAAAGTGTTTGTGCAGGAGTTCCAATGTTGTGTTGGCCATTTTTTGCTGATCAGCCAATGGACTGCAGATATGCTTGCACTAAGTGGGGCATTGGGATGGAGATTGACACTAAtgtgaagagagagaaagtggagAAGCTGGTAAATGAGTTGATGGTGGGAGAGAAggggaagaagatgaaggaaaAGACCATGGAGTGGAAGAAATTGGCTGAAGAGAGCACTAGTTTCGGTGGTTCTTCCTACATAAACTTGGACAAAGTAATCAAGGAGGTGATGCTAAAACAAAAGTA 1454 0.401 MGSVSEGKPHAVLTPYPVQGHINPMMKLAKLLHTRGFHITFVLTDFNHKRLLKSRGSSALDGLPDFQFKTIPDGLPPMDADVTQDIPSLCDSTQKNCLIPYCNLLTRLNESASVGLIPRVNCLVSDVSMSFTIDAAEQFGVPIVLLWPSSAASCLGAAHYHSLVEKGLLPLKDESYFTNGYLDTVIDCIPGMKDIRLKDLASFLITTDPNDLMLDFVVGVMDRAHRASAIVFNTFDGFESEEVNALSSVYPSLSLHAIGPFPSFLNQAPENQLVSIGSNLWKEETECLEWLETKKPGSVVYVNFGSITTMSREQLFELAWGLANSKKPFLWIIRPDLVNGGSVILSSEFVNETKDGGFIASWCPQEQVLNHQSIGGFLTHCGWNSMTESVCAGVPMLCWPFFADQPMDCRYACTKWGIGMEIDTNVKREKVEKLVNELMVGEKGKKMKEKTMEWKKLAEESTSFGGSSYINLDKVIKEVMLKQK 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00877 484 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 5 56 - -
Bva13g00877 484 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 56 479 - -
Bva13g00877 484 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 476 - -
Bva13g00877 484 CDD GT1_Gtf-like 9 440 IPR002213 GO:0008194
Bva13g00877 484 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 298 453 IPR002213 GO:0008194
Bva13g00877 484 ProSitePatterns UDP-glycosyltransferases signature. 362 405 IPR035595 -
Bva13g00877 484 PANTHER GLYCOSYLTRANSFERASE 5 56 - -
Bva13g00877 484 PANTHER GLYCOSYLTRANSFERASE 56 479 - -
Bva13g00877 484 Gene3D Glycogen Phosphorylase B; 10 466 - -
Bva13g00877 484 Gene3D Glycogen Phosphorylase B; 282 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00877 Bva-Chr13 4097563 4099680 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00877 8 484 Glycosyltransferase AT1G22400 55.925 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00877 - - gmx:100787108 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00877 13 4097563 4099680 Bva13g00877 13 4097563 4099680 ECH